Gene Cpin_6734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6734 
Symbol 
ID8362925 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8436794 
End bp8438425 
Gene Length1632 bp 
Protein Length543 aa 
Translation table11 
GC content46% 
IMG OID644968866 
Producthypothetical protein 
Protein accessionYP_003126336 
Protein GI256425683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.216444 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.227552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGCT ACTATAAGAA AAGCATGTGG GTGATCGCAG CAGCTGTATT GCTCGGCGCC 
AGCGCATGTA CCAAGAACTT CGAATTATAC AACTCAGATA ACACCGGTAT CAATCCTGAC
GATCTGAAAG GAGATTTTAA CGACGTAGGC GTGTTCCTGA CAAGGGCACA GCGCTCCATT
ATTAACTTCT CTGATGGTGG TGATCCAAAC TCTTATCAGT TACAACAAAA TCTGAATGCA
GACTGCTATT CAGGTTACTT TATGTCGCCG AATCCATTTA ACGGCGGACA AAACAACCTC
TCCTACTCCC TTATCAGCGG CTGGAACGGC GAACCATTCA AGGTAGGTTA CCTGAATATC
ATGTCGTCTG TTAACAGACT GCGTACAAAT GGAGTAAACA CCTCTTATCC TGCAGTATGG
GGCATCGCCC AGGTACTGCA GGTGGCAGGT ATGAGCCGTA TTACTGATAT CTACGGTCCT
ATTCCTTACA GTCAGGTAGG TACAAGCAAA AGCGCTATTC CTTATGACAG TCAGGAAGAC
GTATACAAAC GTTTCTTCCT CGAACTGGAT AGCGCGAATA TCAATCTGCG TAATCAGATC
AATCATGTAA CTGATTCACT GCCTTTCGAT TTTGCAAAAT TTGACCTGGT ATACGATGGC
GACTTCACCA GATGGTTACA ATTCAGCAAT AGCTTACGCC TTCGTCTCGC CATGCACATT
GTGAAAGCAG CGCCGGCACT GGCAAAAGAA CAGGCTGAAA AAGCGATGGA CCCTGCCAAC
GGAGGAACGA TCACTTCGAA TACCGGTAAC ATGAAAGTAA AAGTAGCTGG CTCCGGATTC
AGTAACCCAC TGGTGTTCAT TGCGCTGAAC TGGGCTGATA TCCGCATCGG TGCTTCTATC
CAGAGCTACA TGACCGGATA CGCCGATCCT CGTATCAGCA AGTATTTTGA CATGTCTACC
GATACCACTT TCCCATCCAG GTACCAGGGT ATCCGTATCG GTTCTGTCGG CGGTAATGCT
GCCAAAGGAG ACTATACCGG TTATTCCAAT CTTGATGTAA CAGGTAGTAA CCCTTCATTT
ACACTTACCA CACCAACACA GATAATGACT GCTGCAGAAG TATATTTTCT GAGAGCAGAA
GCTGCCCTGC GTGGTTGGGC AAATGCCGGC GGATCTGTAC AGACATTATA TGAACAGGGT
ATCAATACCT CTATGGAGCA ATGGAACGTA AATGCAGGTA CTTATGTATC TGATAATACA
CACAAACCTG CTGGCTTCAC TGATCCGAAG AATAGTGCTG CTAATGCGCC TGCCCCTTCT
GAGATCACAG TGAAATGGGA TGATGGTGCA TTGGAAGCTG TAAAAATGGA ACGTATCATC
ACCCAGAAAT GGATCGCGAT GTTCCCTGAA GGTCAGGAAG CATGGACTGA ATTCCGCCGT
ACCGGTTATC CGAAACTGTT CCCTGTTGTG AATAACTTCA GTGGTGGCGT GATCAATTCA
GCTACTCAGA TCAGACGTAT ACCTTTCCCA CAAAACGAGT ATAATACCAA TAATCCGGAA
GTGCAGAAAG CAATTACATT GCTGAACGGA CCTGATAATG GTGCTACCAG AGTATGGTGG
GATGTACAAT AA
 
Protein sequence
MKRYYKKSMW VIAAAVLLGA SACTKNFELY NSDNTGINPD DLKGDFNDVG VFLTRAQRSI 
INFSDGGDPN SYQLQQNLNA DCYSGYFMSP NPFNGGQNNL SYSLISGWNG EPFKVGYLNI
MSSVNRLRTN GVNTSYPAVW GIAQVLQVAG MSRITDIYGP IPYSQVGTSK SAIPYDSQED
VYKRFFLELD SANINLRNQI NHVTDSLPFD FAKFDLVYDG DFTRWLQFSN SLRLRLAMHI
VKAAPALAKE QAEKAMDPAN GGTITSNTGN MKVKVAGSGF SNPLVFIALN WADIRIGASI
QSYMTGYADP RISKYFDMST DTTFPSRYQG IRIGSVGGNA AKGDYTGYSN LDVTGSNPSF
TLTTPTQIMT AAEVYFLRAE AALRGWANAG GSVQTLYEQG INTSMEQWNV NAGTYVSDNT
HKPAGFTDPK NSAANAPAPS EITVKWDDGA LEAVKMERII TQKWIAMFPE GQEAWTEFRR
TGYPKLFPVV NNFSGGVINS ATQIRRIPFP QNEYNTNNPE VQKAITLLNG PDNGATRVWW
DVQ