Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6734 |
Symbol | |
ID | 8362925 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 8436794 |
End bp | 8438425 |
Gene Length | 1632 bp |
Protein Length | 543 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644968866 |
Product | hypothetical protein |
Protein accession | YP_003126336 |
Protein GI | 256425683 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.216444 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.227552 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGCT ACTATAAGAA AAGCATGTGG GTGATCGCAG CAGCTGTATT GCTCGGCGCC AGCGCATGTA CCAAGAACTT CGAATTATAC AACTCAGATA ACACCGGTAT CAATCCTGAC GATCTGAAAG GAGATTTTAA CGACGTAGGC GTGTTCCTGA CAAGGGCACA GCGCTCCATT ATTAACTTCT CTGATGGTGG TGATCCAAAC TCTTATCAGT TACAACAAAA TCTGAATGCA GACTGCTATT CAGGTTACTT TATGTCGCCG AATCCATTTA ACGGCGGACA AAACAACCTC TCCTACTCCC TTATCAGCGG CTGGAACGGC GAACCATTCA AGGTAGGTTA CCTGAATATC ATGTCGTCTG TTAACAGACT GCGTACAAAT GGAGTAAACA CCTCTTATCC TGCAGTATGG GGCATCGCCC AGGTACTGCA GGTGGCAGGT ATGAGCCGTA TTACTGATAT CTACGGTCCT ATTCCTTACA GTCAGGTAGG TACAAGCAAA AGCGCTATTC CTTATGACAG TCAGGAAGAC GTATACAAAC GTTTCTTCCT CGAACTGGAT AGCGCGAATA TCAATCTGCG TAATCAGATC AATCATGTAA CTGATTCACT GCCTTTCGAT TTTGCAAAAT TTGACCTGGT ATACGATGGC GACTTCACCA GATGGTTACA ATTCAGCAAT AGCTTACGCC TTCGTCTCGC CATGCACATT GTGAAAGCAG CGCCGGCACT GGCAAAAGAA CAGGCTGAAA AAGCGATGGA CCCTGCCAAC GGAGGAACGA TCACTTCGAA TACCGGTAAC ATGAAAGTAA AAGTAGCTGG CTCCGGATTC AGTAACCCAC TGGTGTTCAT TGCGCTGAAC TGGGCTGATA TCCGCATCGG TGCTTCTATC CAGAGCTACA TGACCGGATA CGCCGATCCT CGTATCAGCA AGTATTTTGA CATGTCTACC GATACCACTT TCCCATCCAG GTACCAGGGT ATCCGTATCG GTTCTGTCGG CGGTAATGCT GCCAAAGGAG ACTATACCGG TTATTCCAAT CTTGATGTAA CAGGTAGTAA CCCTTCATTT ACACTTACCA CACCAACACA GATAATGACT GCTGCAGAAG TATATTTTCT GAGAGCAGAA GCTGCCCTGC GTGGTTGGGC AAATGCCGGC GGATCTGTAC AGACATTATA TGAACAGGGT ATCAATACCT CTATGGAGCA ATGGAACGTA AATGCAGGTA CTTATGTATC TGATAATACA CACAAACCTG CTGGCTTCAC TGATCCGAAG AATAGTGCTG CTAATGCGCC TGCCCCTTCT GAGATCACAG TGAAATGGGA TGATGGTGCA TTGGAAGCTG TAAAAATGGA ACGTATCATC ACCCAGAAAT GGATCGCGAT GTTCCCTGAA GGTCAGGAAG CATGGACTGA ATTCCGCCGT ACCGGTTATC CGAAACTGTT CCCTGTTGTG AATAACTTCA GTGGTGGCGT GATCAATTCA GCTACTCAGA TCAGACGTAT ACCTTTCCCA CAAAACGAGT ATAATACCAA TAATCCGGAA GTGCAGAAAG CAATTACATT GCTGAACGGA CCTGATAATG GTGCTACCAG AGTATGGTGG GATGTACAAT AA
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Protein sequence | MKRYYKKSMW VIAAAVLLGA SACTKNFELY NSDNTGINPD DLKGDFNDVG VFLTRAQRSI INFSDGGDPN SYQLQQNLNA DCYSGYFMSP NPFNGGQNNL SYSLISGWNG EPFKVGYLNI MSSVNRLRTN GVNTSYPAVW GIAQVLQVAG MSRITDIYGP IPYSQVGTSK SAIPYDSQED VYKRFFLELD SANINLRNQI NHVTDSLPFD FAKFDLVYDG DFTRWLQFSN SLRLRLAMHI VKAAPALAKE QAEKAMDPAN GGTITSNTGN MKVKVAGSGF SNPLVFIALN WADIRIGASI QSYMTGYADP RISKYFDMST DTTFPSRYQG IRIGSVGGNA AKGDYTGYSN LDVTGSNPSF TLTTPTQIMT AAEVYFLRAE AALRGWANAG GSVQTLYEQG INTSMEQWNV NAGTYVSDNT HKPAGFTDPK NSAANAPAPS EITVKWDDGA LEAVKMERII TQKWIAMFPE GQEAWTEFRR TGYPKLFPVV NNFSGGVINS ATQIRRIPFP QNEYNTNNPE VQKAITLLNG PDNGATRVWW DVQ
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