| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6682 |
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| Symbol | |
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| ID | 8362873 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8378311 |
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| End bp | 8381568 |
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| Gene Length | 3258 bp |
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| Protein Length | 1085 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968816 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003126286 |
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| Protein GI | 256425633 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTGTTA ATTTAACAAG ATACAGCTAC GGCTGTAGTG TAGTGTTATT AACGCTCGTC
TTCACCCTTA TGTCTAATTT TGCCAATGCA CAAGGCACGG CGGACACGCG TGTCAGTGTG
TCCGGGACTA TCAAGGACGG AGGAGACGGC ACATTCGTTC CAGGCACATC GATCAGTATC
TCTGATTCTA AAGCAGGTGC AGTATCAAAT ATAGATGGCG GCTTTACCAT CAAAGCCAAT
GTAGGTAGCA CCCTGACATT CTCAATTGTC GGCTATCTGC CTTTTACTTA TAAAGTGAAA
GGTGCTGAAT CCAATGTAGC TATTGTATTA AAGCGCGATA AAACGGACCT TAAAGATGTA
GTGGTTATCG GTTATCAGGA AGCTTCCCGC AAGAGTGTGA CGGCTTCTGT GACTTCTGTA
AATCCTAAAA ACTTATTGGA TGTCCCTACC CCCTCACTGG GTGCGCTCTT ACAAGGTCGT
GCGCCTGGAC TGGACGTCCA GAACTTTTCG GGTGAACCTG GTGTAAGAAG TAATATAGTA
ATGCGTGGTA ATACAGCAGT CAGTAGAAGT ATCAACAGTG ACTTCACCAC TGCCCAAGGT
AAAGCAAGTC TTGCCCGTGC TTTGAGTGGC CCATTATATG TAATTGATGG GGTACCACAA
AGTACAGAAG ATATCGCTGC CATCAACTAT GGTAGTGGTA CCAATACGGA TGCGTTAGCA
GGTATTGCCG TAAATGACAT CCAGAGTATT GACATCCTGA AAGATGCGTC TGCTGCTGCC
ATTTACGGTT CCAGGGGTGC TGGTGGTGTC ATTATCATCA CGACCAAGCG TGGTATTACC
GGTAGACCCA GAATCGACTT CTCTGCTTAT CATGGTATCA CAGATATGCC GTCGCTTGAT
AAGATATTGA TCGGTGCTGA AGAACGCCGG GGCAAAATGG CATTGATACA GCATTATGGA
CAATACCTAA ACCTCCAGAA TATTCCTCAG ATACTTACGG ACAGTCTGAA TCCCGCTTTT
AACAACGCAA ACGACTATCA GGGCCAGCTG TATCAAACGG GCCAGGTTGG TAACTATGAC
CTTTCCGTAA GTGGAGGTAC TAATCTTATC AACTACAGGT ACTCTCTTAA TTATTATGAT
GAAGAGGGCA TTATCAAGAA ATCCGGTTTT CAGAGATATA GTTTCAGTAG CACTACTGGT
TTGAATTTAT CTCCCAAACT GAATATCAGC ACCATTATCC GCTATGCCAG ATCCGACAGA
CCCAGATCTA TTAATGATCT GTCAGGAGGG TATGGTCCTT TTAATGGCGG TTATTACGCT
TCAAGCCCTT TACCATCGTC AGCATTATAT TTATCGCCTG CTAATGCGGC TTTCATTTTC
GGCAATACTA CCAATCAGAC AGACCGCAAC TCAGATGATA ATTTGTCCAT CAGTCCTGTA
ATTGACTGGA AAATCTCTAA AAAATTCAGC TTTAATACAG TAATATCTTA CACGGCACAT
AGTGCACGTT CGGATTCATA TACCCCAGGC GCGGTAAGAA GAGATGGAAC GGGAGCCGCA
TCCAGCTTTG TGGAAAACAG GAACAATTAC CTGATGAGTA ATGCCCTTCA ATACACCACC
GGATTGGGTG AACACCATAC CCTGAACCTG TTGTTGGGTC AGAATACGGA GTACATGGAA
TACAGGGCGA CAATATCAAG CGCAGTAGGT ATTCCGAATG ACCAGATCCG GACAGTTACG
GTACTTGATA AGAATCTGGC TGAAACCAGC ACCGACTTGC TACAGAGCGG AATTCAGACG
GGTTTCCTGC GTGTCAACTA TGGCTTTAAA GGACGCTATC TGTTATCTGC TGTAATAAAT
GCGGATGCTT CTTCCCGTTT TGGTAAAAAC AATCGCTGGG GTTACTTCCC CTCCGTGTCT
GCAGGTTGGG TGATCAGTGA TGAACCATGG CTGAAAAACG AAAGTAGCTG GCTCACGTTA
TTAAAACTGC GCGCAAGTTA TGGTGAAACC GGACGTCAAC CGGATGGTGG TGATAACTAC
CTGTCTTATA ACACCTACAA CATTGGTGCA GGCGCCTTCC CTGGTAGCAC CAACCCTTCT
ACAGGCAACA ACCAATCCCT ATCTTACAAT GGTGTTCCTG CGATCTCCCT TAATTTTGAT
AAAGGTCTTT CCAACCCAAA CCTGAGCTGG GAGAAAACAA GCCAATCGAA CCTGGGTCTG
GATCTTACTT TGTTGAATGG GCGTTTTAGC GTAGTGACAG ATGCATATGT TAAATCCACA
CATGGAGGGA TCTTCACACT GGCGGTGCCT ATCACTACCG GTTATTCCAC TAACACCGCC
AATGCTATTG GTGTGAGAAA TACAGGGGTA GAAATGCAGT TCATTGCCAA TATCTTTGAA
CCTACCAAAC CATTCCAATG GCAGTTCCTG TTGAACATCG CCCATAACGA TAACATCATT
ACCTCTTTAC CAAATGGTGG CCGCGATATC TATCTTGATA AATACTTGTT GAGACAAGGT
CAGCCTATTA ACACATACAA TACATTCAAA GCAACCGGTA TATACAGAAC CGATGCTGAT
GTACCTGTGA ATCCTGTAAC AGGTTCAGTT CTCAACTTCT ATGGTTATCC CTTCAGAGGA
GGAGACCCGA TCTGGCAGGA TTCCAATGGA GACGGCGTAC TGGATGCAAC AGACTATGTT
CCTACGGGCA ACCCCAATCC TAAATTGACA GGTGGTTTCA GTAACACATT CAGCTATAAA
AGATTTACAC TGGATATCTT CTGTACGTTC ACTGCCGGTC GTCAGATCTA CAATGATTAC
TTAGCGGGAA GATTGTCCCA GCTGGTACCG ACTGATGATG GTGATCCAAA TCCCTTACAC
TCGATCAGTA CACACTCCCT GCCCGACCTG AATGGTATCA ATTATTGGTA TAATCCAGGT
GATAATGCAC AGTATCCTTC ATTGAGTTCT GTAACAGGTA CCCGTTATAA ATATGCACTG
GTAAGTTCAC AGTGGGTAGA AAGCGGTGCC TACCTGCGTA TTAAGAAAAT ATCACTGGGT
TATAGCTTGA ATCCCGCATT ACTGGAAAGA GTGCATATGA AGCGTGTGCG TATCTATGGT
CTTGTAGATA ACCTGAAGAT TTTCCAGAAA TCAAAGAATG TACCTGATGC AGAACAGGTA
GATGCCTTTG GTGTATATAG TGGCAGTGGC TATCCCCTGC CTAAGAAATT CACATTGGGA
TTGGATGTCA GTCTATAA
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| Protein sequence | MIVNLTRYSY GCSVVLLTLV FTLMSNFANA QGTADTRVSV SGTIKDGGDG TFVPGTSISI
SDSKAGAVSN IDGGFTIKAN VGSTLTFSIV GYLPFTYKVK GAESNVAIVL KRDKTDLKDV
VVIGYQEASR KSVTASVTSV NPKNLLDVPT PSLGALLQGR APGLDVQNFS GEPGVRSNIV
MRGNTAVSRS INSDFTTAQG KASLARALSG PLYVIDGVPQ STEDIAAINY GSGTNTDALA
GIAVNDIQSI DILKDASAAA IYGSRGAGGV IIITTKRGIT GRPRIDFSAY HGITDMPSLD
KILIGAEERR GKMALIQHYG QYLNLQNIPQ ILTDSLNPAF NNANDYQGQL YQTGQVGNYD
LSVSGGTNLI NYRYSLNYYD EEGIIKKSGF QRYSFSSTTG LNLSPKLNIS TIIRYARSDR
PRSINDLSGG YGPFNGGYYA SSPLPSSALY LSPANAAFIF GNTTNQTDRN SDDNLSISPV
IDWKISKKFS FNTVISYTAH SARSDSYTPG AVRRDGTGAA SSFVENRNNY LMSNALQYTT
GLGEHHTLNL LLGQNTEYME YRATISSAVG IPNDQIRTVT VLDKNLAETS TDLLQSGIQT
GFLRVNYGFK GRYLLSAVIN ADASSRFGKN NRWGYFPSVS AGWVISDEPW LKNESSWLTL
LKLRASYGET GRQPDGGDNY LSYNTYNIGA GAFPGSTNPS TGNNQSLSYN GVPAISLNFD
KGLSNPNLSW EKTSQSNLGL DLTLLNGRFS VVTDAYVKST HGGIFTLAVP ITTGYSTNTA
NAIGVRNTGV EMQFIANIFE PTKPFQWQFL LNIAHNDNII TSLPNGGRDI YLDKYLLRQG
QPINTYNTFK ATGIYRTDAD VPVNPVTGSV LNFYGYPFRG GDPIWQDSNG DGVLDATDYV
PTGNPNPKLT GGFSNTFSYK RFTLDIFCTF TAGRQIYNDY LAGRLSQLVP TDDGDPNPLH
SISTHSLPDL NGINYWYNPG DNAQYPSLSS VTGTRYKYAL VSSQWVESGA YLRIKKISLG
YSLNPALLER VHMKRVRIYG LVDNLKIFQK SKNVPDAEQV DAFGVYSGSG YPLPKKFTLG
LDVSL
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