Gene Cpin_6664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6664 
Symbol 
ID8362854 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8360854 
End bp8361876 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content47% 
IMG OID644968798 
ProductLuciferase-like monooxygenase 
Protein accessionYP_003126269 
Protein GI256425616 
COG category[C] Energy production and conversion 
COG ID[COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAAA TAGGATTTTT ATCGTTTGGA CATTGGTCTA ATCACCCAGC CTATAAAACG 
CGTACGGCGA GTGATACACT ACTTCAATCT ATTGATCTAG CTGTTGCTGC CGAGGCCATC
GGCTTAGACG GTGCTTACTT TCGCGTACAT CATTTTGCGG CTCAGTTAGC CTCTCCGTTC
CCTTTGCTTG CTGCTATCGG CGCTAAAACA AAGAGCATAG AGATCGGAAC AGGTGTTATT
GACATGCGTT ATGAAAACCC GTTGTATATG GTGGAGGACG CCGGAGCTGC CGACTTAATT
TCGGGCGGCC GATTACAGCT GGGAATCAGC AGAGGGTCGC CTGAACAGGT AATTGACGGA
TGGCGTTATT TTGGGTATGA ACCAGCTGAA GGGGAAACTG ACGCAGACAT GGGACGCAGG
AAAGCGTTGG CGTTTCTGGA TAAACTCAAC GGAGTTGGAT TTGCAGCCCC CAATCCATAC
CCAATGTTTC CTAATCCGCC AGGATTATTA CGATTGGAAC CTTACTCTGA ACAATTGAAG
GATCGTATCT GGTGGGGAGC AGGATCCAAT GCTACTGCTA TATGGGCAGC TGAAAACGGA
ATGAACCTTC AAAGTTCCAC CTTGAAATTC GATGAAAGTG GCAAACCATT CCATGTACAA
CAAGCAGAGC AGATCAGGTT GTACAAAGAA GCGTGGAAAA ACGCAGGACA TCAGCGACAA
CCAAGGGTTT CAGTGAGTCG GTCTATTTTT GCATTGATTA ATGATCAGGA TAGATATTTC
TTCGGACAGG AAACGAATAG AGTTGACAAA GTTGGTTTTA TTGAAAGTGA CAAACGCGCT
ATTTTCGGAA GAAGCTATGC CGGAGAACCG GATCAGCTTA TCAGGGAGCT GGCCCAGGAC
GAAGCTATTC AGGAAGCTGA TACACTTCTC TTAACCATTC CAAACACCCT GGGAGTTGAT
TACAACATAC ATGTTCTGTC ATCCATCCTG GAGCATGTCG CTCCCGGATT AGGTTGGCGT
TAA
 
Protein sequence
MKKIGFLSFG HWSNHPAYKT RTASDTLLQS IDLAVAAEAI GLDGAYFRVH HFAAQLASPF 
PLLAAIGAKT KSIEIGTGVI DMRYENPLYM VEDAGAADLI SGGRLQLGIS RGSPEQVIDG
WRYFGYEPAE GETDADMGRR KALAFLDKLN GVGFAAPNPY PMFPNPPGLL RLEPYSEQLK
DRIWWGAGSN ATAIWAAENG MNLQSSTLKF DESGKPFHVQ QAEQIRLYKE AWKNAGHQRQ
PRVSVSRSIF ALINDQDRYF FGQETNRVDK VGFIESDKRA IFGRSYAGEP DQLIRELAQD
EAIQEADTLL LTIPNTLGVD YNIHVLSSIL EHVAPGLGWR