Gene Cpin_6654 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6654 
Symbol 
ID8362843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8345319 
End bp8346374 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content45% 
IMG OID644968787 
Producthypothetical protein 
Protein accessionYP_003126259 
Protein GI256425606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAGG AACTGAATAA ACGATCCGGA GACCTGATGA TCAATCAATC AGAGAAAGCC 
GGACTTAGTA AAGAACAACA GACCTTTAAT AAACTCATAC AGAAGATAGC CCAGCTACGG
CAGGAGCTGA AAGATACCAC TGCCACCCTC GACAAGCAGT TACAGCATTT CCTGAAACAG
ATCTATCCGC TGATGCAACA GGTGGTTGGT CTGCGGTCTG CCGTCGTAGT ACTGATGAAT
GAGTTTATGA CTATTTCCAA AGGACTCTCC GGACATGAAA AAGAAGCCCT CCGACTACTG
ATTATCAATC AGCTGCATGA AATATTCCGC TATCAGCAGG AAGATCCTGA AGGCGAATTA
CTGGAGATTT TCAATGTCCT GTCTGACATT ACCTACCAGG ATCTGACAGA ACAATACCTT
GCTAAATTAA GAGCGGCTGC CGCTGCAAAA GAAAAGGAGG AGGAAACTGC TGACACAACG
TTGCCAATGA AGACAACTGA ACTGGAAGCA GCCGGCAGCA ATAAACGGAA GACGAAACAG
CAGTTACAGA AAGAAGAAAA AGAACGCCTG CTGGAAGAGC TGCGCAGGAA GAATGTACAC
CATCTGTACA GACAACTGGC CAAAGTATTT CATCCGGATC TGGAACAGGA TCCTGAAAGG
ATACAGCAAA AAGAAGAACT CATGAAACAG CTGACTATCG CCAGGGAAAA AGGGGACCTG
CTGTCAATGC TGGAACTGGA ACTTAACTGG ATTCAGCAGG AAGACAGGCA TCCGGATCAG
CTGACCAATG AGAAACTGCG CCTGTATAAT ACCACCTTAC AGGAACAGGT GAAAGACCTG
CAACAACAGA TCAGTAACCT GTTCCATCAC CCCAGATATG CATTTTTACA AGGATTCGCA
AAAAATGTAC AAGGTGTGCG GTTCATTGAC TGGAAAACGG AAAAGAATAA CCTCGACAAT
CTCGCACAGG GATTGAAAGA AATCATTGCA GGTTTATCCA TGGATACCAA GAATGCACTG
AAAGTACTGA AAGGTGTATT AAAATGGAAT AGCTAG
 
Protein sequence
MSQELNKRSG DLMINQSEKA GLSKEQQTFN KLIQKIAQLR QELKDTTATL DKQLQHFLKQ 
IYPLMQQVVG LRSAVVVLMN EFMTISKGLS GHEKEALRLL IINQLHEIFR YQQEDPEGEL
LEIFNVLSDI TYQDLTEQYL AKLRAAAAAK EKEEETADTT LPMKTTELEA AGSNKRKTKQ
QLQKEEKERL LEELRRKNVH HLYRQLAKVF HPDLEQDPER IQQKEELMKQ LTIAREKGDL
LSMLELELNW IQQEDRHPDQ LTNEKLRLYN TTLQEQVKDL QQQISNLFHH PRYAFLQGFA
KNVQGVRFID WKTEKNNLDN LAQGLKEIIA GLSMDTKNAL KVLKGVLKWN S