| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6559 |
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| Symbol | |
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| ID | 8362744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8225697 |
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| End bp | 8227091 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968688 |
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| Product | oxidoreductase domain protein |
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| Protein accession | YP_003126164 |
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| Protein GI | 256425511 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00136961 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC AGCAATTTCA CAGGAGAAAC TTTCTCAAAA CCACTGTGGC CGCAGGTGTA
GGATTGACCC TCCTCAATAC GCCTGCCCGC CTCTTCGCAG ACATCAAAAA GGAAAAAGTA
AGAGTAGGAT TGATAGGTGT AGGCGCCCGC GGACAAGGGC ATCTGGACCT GTGCCTCCAT
CGGGACGATG TAGATGTTGT GGCCATCTGC GATCCGGATA CACAATGGGC AATTCCAAAA
TCCCGTGAAC TGATTACTAA AGCTTATGGC GCTAAAAAGA AAGTAGCCGA ATACAGCAAC
GGTCCCGAAG ATTTCCACAA TCTTTTAAAA CGGGATGATA TTGACGCTGT TATCATCGCT
ACACCGTGGG AATGGCATAC CATCCAGGCT ATTGCAGCCA TGAAAGCAGG TAAAACGCCT
GCCGTAGAGG TTTGTGGCGC ATCAGATATC CAGGAATGCT GGAACCTGGT GAACACCAGC
GAAGATACCG GCGTACCGGT ATTTGGTATG GAAAACGTAT GCTATCGCCG GGATGTAATG
GCCGTACTGA ATATGGTGAG ACAAGGTCTT TTCGGCGAAC TCACACACCT GCAGGGCGGC
TATCAGCACG ACCTCCGCAA AGTGAAATTC AACAATGGAA AACAACTCTA CGGCGGTGGT
GTCGAATTTG GCGAAAAAGC CATGTCTGAA GCCAAATGGC GTACAAACCA CAGCGTACAC
CGTAACGGTG ACCTCTATCC CACACATGGT CTGGGTCCCG TAGCCAATAT GATCAATATC
AACCGTGGAA ACAGGCTGCT GTCACTGACA TCCGTAGCCA CCAAATCCAG GGGATTACAT
AAATACGTTG TGGATAACGG AGGAGAAAAT CACCCGAATG CCAAAGTGGA ATTCAAACTC
GGTGATATTG TGACCACCCT GCTCCGCACC AACAATGGAG AAACTATCAT GCTCTCACAT
GATACCAACT CTCCCCGCCC CTATTCGCTC AACTTCCGCG TACAAGGCAC CAATGGCCTG
TGGATGGACG ATTTCGACTC CATTTATGTA GAAGGTAAAA GCCCTTATGA CGAATGGGAA
AAAGCAGGTA GTGACAAGGA TCCGAACAGT TATATGGGCA AATACGACCA TCCGCTGTGG
AGACGCTATA CCAGCAGTGC TGCAGGCGCA GGACACGGAG GAATGGACTG GTTTGTGATC
AATTCCTTTA TCGAAAGCGT AAAAAGAGGC GCACCTTATG CGCTGGATGT ATATGACCTG
GCCACCTGGT ATGCGATTAC GCCGCTGAGT GAACAGTCTG TAGCCGAAGG AGGTAATGTG
CAGTATATAC CGGACTTTAC AAGAGGAAGG TGGATGAACC GAAAACCGAT ATTTGCGCTG
GACGACCAGT ACTAA
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| Protein sequence | MKKQQFHRRN FLKTTVAAGV GLTLLNTPAR LFADIKKEKV RVGLIGVGAR GQGHLDLCLH
RDDVDVVAIC DPDTQWAIPK SRELITKAYG AKKKVAEYSN GPEDFHNLLK RDDIDAVIIA
TPWEWHTIQA IAAMKAGKTP AVEVCGASDI QECWNLVNTS EDTGVPVFGM ENVCYRRDVM
AVLNMVRQGL FGELTHLQGG YQHDLRKVKF NNGKQLYGGG VEFGEKAMSE AKWRTNHSVH
RNGDLYPTHG LGPVANMINI NRGNRLLSLT SVATKSRGLH KYVVDNGGEN HPNAKVEFKL
GDIVTTLLRT NNGETIMLSH DTNSPRPYSL NFRVQGTNGL WMDDFDSIYV EGKSPYDEWE
KAGSDKDPNS YMGKYDHPLW RRYTSSAAGA GHGGMDWFVI NSFIESVKRG APYALDVYDL
ATWYAITPLS EQSVAEGGNV QYIPDFTRGR WMNRKPIFAL DDQY
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