Gene Cpin_6539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6539 
Symbol 
ID8362723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8203089 
End bp8203931 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content49% 
IMG OID644968667 
ProductN-acetylglucosamine kinase-like protein 
Protein accessionYP_003126144 
Protein GI256425491 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2971] Predicted N-acetylglucosamine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0668062 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.404447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAC AGCTAATTGC AGATAGTGGA TCTACCAAGG CAGAATGGTG CCTGTTGGGG 
GCCAGAGAGA CCGGCCGTTA CAAGACAACC GGTATCAGCC CGTATTTTCT GAATGCAGCA
CAGATCAAAG AGCTGCTGGA GAAAGAGTTA CTACCGCAAC TACCTCCCGA TGTGCAGATA
GACGAGGTCC ATTATTATGG AACCGGTTGT TTACAGCGTA AGAGTGTCGA GATTGTGGAA
TCTGCCCTGA AAGCCGTATG GCCTGTTGCG GCAATAGAGG TGAACCACGA CCTGATGGGA
GCTGCCAGAG GCTTGTGTGG GAAAGAGCCG GGTATCGCGA GTATCCTAGG GACGGGGTCT
AATTCCTGTT ATTTTGACGG CAAGACCATT CAGAAGAACA ATCCCGGACT CGGTTATGTA
CTGGGAGACG AGGGGAGTGG CGCTTACCTG GGTAAAAAAC TCCTGCAATA CTATCTATAT
AACTCCTTTG ACGAAGAGCT GAAGGCGCGT TTTGACGCCC AGTATAACAC CAATCATGAG
GAGATACTGG AAAACGTGTA CCGCAGACCG CTTCCTAACC GCTACCTGGC TAGTTTTGCG
CAGTTTCTGG GCGAGAACAG GGGCCATTTC ATCGTAGAAA ACATCCTGGA AGACAGTTTA
AACGAATTCT TCTTTAGCCA TATTTATAAG TACAGCGAAA GCTGGACACA CCCACTGCAC
TTCACCGGAA GTATAGCCTG GCATTTCCAG GATATCCTGA ATGAACTGTG TGAACTGTAT
GAGTTGCAGA TGGGCCGGAT ATTGCGCAGT CCTATGGATG GACTGATGGC ATATCATCAA
TAA
 
Protein sequence
MKVQLIADSG STKAEWCLLG ARETGRYKTT GISPYFLNAA QIKELLEKEL LPQLPPDVQI 
DEVHYYGTGC LQRKSVEIVE SALKAVWPVA AIEVNHDLMG AARGLCGKEP GIASILGTGS
NSCYFDGKTI QKNNPGLGYV LGDEGSGAYL GKKLLQYYLY NSFDEELKAR FDAQYNTNHE
EILENVYRRP LPNRYLASFA QFLGENRGHF IVENILEDSL NEFFFSHIYK YSESWTHPLH
FTGSIAWHFQ DILNELCELY ELQMGRILRS PMDGLMAYHQ