Gene Cpin_6527 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6527 
Symbol 
ID8362711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8189438 
End bp8189836 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content45% 
IMG OID644968655 
Productresponse regulator receiver protein 
Protein accessionYP_003126132 
Protein GI256425479 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.498145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0582996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAAA ACACTAAACA GGTGTATGTT GTTGACGACG ATGAAATATT CCATTTCATT 
CTGAAAAAGT TGTTCGAGCA ACAGGACGAT CAGCTCAAGG TGACATCCTT CCTCTGTGCG
GAAGATGCGC TGGCCCGTTT ACAACAACCT GATAACCAGC GCCTGCCATC CCTGATCATC
CTGGATATGA ACATGCAACG CATGAATGGC TGGGACTTTA TCGAAGCCTA CCGTGATATC
AAATCCAGCC TGAGTCAGCA GATCCCTATC ATCATGTGTT CTTCCTCTAT CGATATGCGC
GATATGCAGA AAGTAAAACG TACACCAGAG TTGAAGGCTT ACATCACCAA GCCCCTGGAT
TCAGTAAAAA TGCAGCAGAT CAAAGATTAT TTGTCTTAA
 
Protein sequence
MAENTKQVYV VDDDEIFHFI LKKLFEQQDD QLKVTSFLCA EDALARLQQP DNQRLPSLII 
LDMNMQRMNG WDFIEAYRDI KSSLSQQIPI IMCSSSIDMR DMQKVKRTPE LKAYITKPLD
SVKMQQIKDY LS