Gene Cpin_6526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6526 
Symbol 
ID8362710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8188174 
End bp8189136 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content44% 
IMG OID644968654 
Producthypothetical protein 
Protein accessionYP_003126131 
Protein GI256425478 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.435938 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.151944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAGA ACACTTTTAA CAAGCCTGCG GCAGGATCCC CTGGACCTGA AAAACCTAGA 
AGCCGTAATG GTCTGATATA TGGTATTTTG ATTGCAGCAT TGGCCGGTAC CTGGATCTAT
ATGTTGTATG ACAAAAATAA AACTACCGAT CAAATTGCTC AACAGGCAAC ACAGATAGAT
TCCATCTCTA CATCAAGAGA TGCTTTACAA CAGGAATATA ATGCCGCAAA TGCACGTCTG
GATGATCTGA TCTCCCAGAA CAGTCGCATG GATAGCCTTG TAAAAACAAA AGATAAGGAA
ATTGCGGACA TGAAATCCAG GATTCAGGGT ATCCTGTCCA ACAAAAACGC AACTTCCAAA
GAACTGGCTG AAGCACGTCG CCTGATCGAA ACACTGAAAG GAAACATCGA AGGCTATACG
GAAACAATCG AACGCCTGGA AGGTGAGAAA ATCGTTCTGA CCGGCGAACG CGATAATGCC
CGTAAAGAAA GAGATGTAGT AACCACTCAG AGAGACAGCC TGGACAAAAA GGTGAACCTG
GGTTCCGTAT TACACGCATC CAACATTCAC CTGCAGCCGA TCAACCTGAA AAAGAACGGC
AAAGAAGTGG AAACGACCAA GGCTAAACGT GCTGATATGA TGCGCGTAAC TTTTGACCTG
GATGAAAACA GAATCGCTCC AACCGGCGAT AAAGAACTGT ACGTTTCTAT CACTTCTCCT
GATGGTTCTC CACTGGCTGT TGAAGCACTG GGTTCCGGCA GATTTACACT GGAAGATGGC
ACTGAGAAAT TATACACTGC CAAGAAAACT GTAAACTATG CTACCGGTCA GAAGCAATCA
GTATCTATGG ACTGGAAACA GAATTCAGAT TTCAAACCAG GCGATTATGC TGTTGAAATC
TATCACGATG GTTATAAAAT TGGTTCCGGT AAAGTAACGC TGAAAAAAGG CGGACTTTTC
TAA
 
Protein sequence
MTENTFNKPA AGSPGPEKPR SRNGLIYGIL IAALAGTWIY MLYDKNKTTD QIAQQATQID 
SISTSRDALQ QEYNAANARL DDLISQNSRM DSLVKTKDKE IADMKSRIQG ILSNKNATSK
ELAEARRLIE TLKGNIEGYT ETIERLEGEK IVLTGERDNA RKERDVVTTQ RDSLDKKVNL
GSVLHASNIH LQPINLKKNG KEVETTKAKR ADMMRVTFDL DENRIAPTGD KELYVSITSP
DGSPLAVEAL GSGRFTLEDG TEKLYTAKKT VNYATGQKQS VSMDWKQNSD FKPGDYAVEI
YHDGYKIGSG KVTLKKGGLF