| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6517 |
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| Symbol | |
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| ID | 8362701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8178449 |
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| End bp | 8180830 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644968645 |
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| Product | Polyribonucleotide nucleotidyltransferase |
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| Protein accession | YP_003126122 |
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| Protein GI | 256425469 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.433198 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.175574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCTGA CACCTATCTC AGTTAATTTC GATATAGGAG ATGGCCGGAT CGTGACCATT
GAAACTGGTA AGTTAGCCCG CCAGGCAGAT GGCGCCGTTA CGGTTCGTCT GGGCAATTGT
ATCCTGTTGG CTACGGTTGT TGCAGCAAAA ACTCCAAAAC CCGGACAATC TTTCTTCCCC
CTTACTGTTG ATTACCAGGA AAAATTTGCT TCTGCAGGAC GTATCCCCGG TTCATTCTTT
AAACGCGAGG GTAAACTGTC CGATTATGAA GTGCTGATTT CACGTTTGAT CGACCGCGCA
CTGCGCCCAC TGTTCCCTGA TGACTATTTT TGCGAAGTAC AGGTACTGGT TAGCCTCATC
TCTTCCGATC CGGAAGTGAT GCCGGATGCA CTGGCCTGCC TTGCTGCTTC TGCTGCACTG
GCTGTTTCTG ACGTGCCTAT TCAGGAGATT ATTTCCGAAG TAAGAGTGTC CCGCATCGAC
GGACAATTAG TTATAAATCC GAACCGTACT CCGCTGGAAA AAGCAGACAT GGACTTCATC
ATTGGTGCTA CTGAAAAGAA CATCATGATG GTGGAAGGTG AAAGTAAGGA GTGCAGTGAG
GAAGATATCA TCAAAGCTAT CGAAGTTGCA CACGAAGCTA TCCGCGTACA GGTGAAAGCA
CAGGAAGAAC TCCGTGAGAA AGCCGGGGTA AGCGGCAAAC GTGAATTCGA AAAGCCATAC
GCAAATGAGG AGTTGAAAGC AAAAATTGCT GCATTCGCTC AGGAACGTAT CCTCGCCGTA
GCAAAATCCG CTTCTGCAAA ACACGATCGT GCAGATGCTT TCGATAAAAT CAGCGAAGAG
CTGGTAGAAC ACCTGGGTGA GCTGCCTGAA GAAGATGCTC CACTGGTAGG TAAATATTTT
CATAGCCTGG AAAAAGAAGT GATTCGTAAC ATGATCCTGG ATCAGTCCGT TCGTCTGGAC
GGTCGTAGCC TGGACCAGGT TCGTCCGCTG GCCATGGAAA CAGATATCCT GCCTTCTCCA
CACGGTTCTG CACTGTTCAC ACGTGGTGAA ACCCAGTCCC TGACCACAGT AACCCTGGGT
ACACCGGATG ATGAACTGCT GAGCGAAAGC GCCGCAACTT CAAAATATAC TAAGTTCATA
CTCCACTATA ACTTCCCTCC GTTCTCTACA GGTGAAGTAA AACCAATGCG CGGTCCCGGC
CGTCGTGAGG TAGGTCATGG TAACCTGGCA ATGCGCTCCC TGAAGCAGAT GATGCCAGGA
AGCGAATATG CTTATACCGT GCGTGTAGTA TCCGATATCC TCGAGTCTAA CGGTTCCTCT
TCTATGGCGA CCGTATGTGC TGGTTCCCTG GCACTGATGG ACGCAGGTGT TCCTTTGCCT
AAACACGTTT CCGGTGTGGC AATGGGTCTG ATCTCCCGTG CCAGCGATGG TAAATGGGCA
GTACTGACAG ATATCCTCGG TGATGAAGAT CACCTGGGTG ATATGGACTT CAAAGTAACT
GGTACCCGTG ATGGTATCTG TGGTATCCAG ATGGATATCA AGGTAGATGG TCTGAGCATG
GATGTAATGC GCAAAGCACT GGAGCAGGCA CGTAGCGGCC GTCTTCACAT CATTGACGCC
ATGTACACTG CTATGCCAGC TGCACGTCCG GAACCAAAAC CACATGCTCC ACGTATGGAG
AAACTGATCA TCGACCGCGA ATTCATCGGT GCTGTGATCG GACCAGGTGG TAAAGTAATT
CAGGAAATTC AGCGTGAAAC CGGTACTAAC ATCAACATCG AAGAAGTTGG TGAAACCGGT
GAAGTAAGCA TCTTCTCTGC ACAAAAAGAA GGGCTGATGA AAGCGCTCGA GTGGATCAAA
GGTATCGTAG CCGTGCCAGA GATCGGTGAA ACTTATGAAT CAACTGTTAA GTCAGTAATG
CCTTACGGTG CATTCGTTGA GTTCCTGCCT GGTAAACAAG GTTTGCTGCA CATCTCCGAA
GTATCCTGGA AACGCCTGGA AACAATGGAA GGTGTACTGA CTGAAGGTGA AAAGGTAAAA
GTGAAACTGG TAGGTACTGA TCCTAAGACC GGTAAGTTCA AACTGAGCCG TCGTGTACTG
ATGCCAAAAC CAGAAGGTTA TGTAGAAAGA CCTGAAGGTG ACCGTGGCGA CAGAGGTGAT
CGCGGTGACA GAGGAGATAG AGGTGACAGA GGCGATCGTG GTGATCGTGG TGGCCGTCCT
CCTTTCCGTG GTGATCGTAA TGATCGTGGC GGAGATCGCG GTGGTGACCG TGGCGATCGT
CGTGGTCCAC GTGATGGTGG CGACAGCCGT GGCGATCGTG GTCCTCGTTT CACACCTCCG
GAAACAGAAA CTCCACAGGA ACCAATGTTC GATGAAGAAT AG
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| Protein sequence | MNLTPISVNF DIGDGRIVTI ETGKLARQAD GAVTVRLGNC ILLATVVAAK TPKPGQSFFP
LTVDYQEKFA SAGRIPGSFF KREGKLSDYE VLISRLIDRA LRPLFPDDYF CEVQVLVSLI
SSDPEVMPDA LACLAASAAL AVSDVPIQEI ISEVRVSRID GQLVINPNRT PLEKADMDFI
IGATEKNIMM VEGESKECSE EDIIKAIEVA HEAIRVQVKA QEELREKAGV SGKREFEKPY
ANEELKAKIA AFAQERILAV AKSASAKHDR ADAFDKISEE LVEHLGELPE EDAPLVGKYF
HSLEKEVIRN MILDQSVRLD GRSLDQVRPL AMETDILPSP HGSALFTRGE TQSLTTVTLG
TPDDELLSES AATSKYTKFI LHYNFPPFST GEVKPMRGPG RREVGHGNLA MRSLKQMMPG
SEYAYTVRVV SDILESNGSS SMATVCAGSL ALMDAGVPLP KHVSGVAMGL ISRASDGKWA
VLTDILGDED HLGDMDFKVT GTRDGICGIQ MDIKVDGLSM DVMRKALEQA RSGRLHIIDA
MYTAMPAARP EPKPHAPRME KLIIDREFIG AVIGPGGKVI QEIQRETGTN INIEEVGETG
EVSIFSAQKE GLMKALEWIK GIVAVPEIGE TYESTVKSVM PYGAFVEFLP GKQGLLHISE
VSWKRLETME GVLTEGEKVK VKLVGTDPKT GKFKLSRRVL MPKPEGYVER PEGDRGDRGD
RGDRGDRGDR GDRGDRGGRP PFRGDRNDRG GDRGGDRGDR RGPRDGGDSR GDRGPRFTPP
ETETPQEPMF DEE
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