| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6514 |
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| Symbol | prmA |
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| ID | 8362698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 8175716 |
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| End bp | 8176573 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968642 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_003126119 |
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| Protein GI | 256425466 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.210209 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.104822 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCATG CAGTTAGTTT CTATATCTTT GTTGCTATGG CACATATCGC AATCACCCTG
ACCTGTACCG ATGAATTGAA AGACATACTG GTAGCAGTGT TAGCAGAAAA GGGTTTTGAA
GGTTTTGAGG AACAGCCGGG CAATATCCTG GTGGCTTATA TACCTGCAGA AGATTTTAAT
GAAGCAGATA CAAACGAGCT CACGGCAGGT TTCGGCTTAA CATATACGCA GGAACGCATA
GAACAGACGA ACTGGAATGC TGTATGGGAG AGTAATTTTC AACCGGTACA GGTAGACGAT
TTCTGTGGTA TCAGGGCGTC TTTTCATGAG CCGTTTGATC CGCAGCCACA GCACGAGATA
ATGATCACGC CGAAGATGTC ATTCGGAACG GGGCATCACG CAACGACTTA TTCTGTCATT
AAGCTGATGC AGGATATCGA TTTCAGGGGC AAGCAGGTAT TCGACTTTGG TACAGGTACA
GGCATCCTGG CTATTCTGGC CTGTAAGATG GGTGCTTCTG TGATCGATGC GATTGATATA
GACGAATGGT CTGTGGAAAA CACAAAGGAG AATATTGCCA GCAATAATGC ATTACCGGTG
AAGGTATGGC AGGCTGACAG TCTGAAGAAT ATCAGGAACA GTTATAATGT GGTGCTTGCT
AACATCAACC GCAATATTTT GCTGGAATTT ATGGCTGATA TGCGCCGTCT GCTGGTAAGA
GACGGGATTT TATTACTCAG TGGAATACTG AAAGAAGACG AGACTGCTAT CCTGGAAGCA
GCAAGACAGC ATGCACTGGT GCTGGAAACG CAGCTGGAAA AGAATAATTG GCTGGCAATG
AAATTATTAG CACGATAG
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| Protein sequence | MYHAVSFYIF VAMAHIAITL TCTDELKDIL VAVLAEKGFE GFEEQPGNIL VAYIPAEDFN
EADTNELTAG FGLTYTQERI EQTNWNAVWE SNFQPVQVDD FCGIRASFHE PFDPQPQHEI
MITPKMSFGT GHHATTYSVI KLMQDIDFRG KQVFDFGTGT GILAILACKM GASVIDAIDI
DEWSVENTKE NIASNNALPV KVWQADSLKN IRNSYNVVLA NINRNILLEF MADMRRLLVR
DGILLLSGIL KEDETAILEA ARQHALVLET QLEKNNWLAM KLLAR
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