| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6500 |
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| Symbol | |
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| ID | 8362684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8162642 |
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| End bp | 8163565 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644968628 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_003126105 |
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| Protein GI | 256425452 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.559851 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAGAG AAATAAAGAT AGGTACAAGG GACAGCCAGC TCGCACTGTG GCAGGCAAAT
AAAGTAAAAG GTCTGCTGGA AGCGCAGGGT TACAGTACGG TACTGGTACC TATCAAAAGC
GAGGGAGATA TCGACCTCGT TACTCCACTT TACGAAATAG GCGTACAGGG CATCTTCACC
AAGAGCCTGG ATATCGCACT CCTCAACGGC CGTATTGATA TTGCCGTTCA CTCTCTCAAA
GACGTTCCGA CACAACTGCC TAAAAATATT ATTCAGGCCG CTGTCCTGGA AAGAGGCCCT
GTAAAGGACC TGCTGGTATA CCGTCAGGAT ACCGCCTTCC TCGGACAGCC GGAGTATATC
GCAAACATTG CTACCAGCAG TGTACGCCGT AAAGCACAGT GGCTGCGTAA ATATCCGAAG
CACCAGCTGC ATAACCTGCG TGGGAATGTG AATACCCGCC TGCAGAAGCT GGCTGCTGAA
AACTGGGACG GTGCTATCTT CGCTGCCGCC GGACTGGAAA GAATAGGTGT ACGTCCTGCC
ACTTCTATAG AACTTGACTG GATGCTTCCC GCTCCTGCCC AGGGCGCTGT AGTAGCCGTA
TGCCGGGAAG ATGATGATTT CTGCAGACAG GCATGTGCGC CTTTCAACGA CCTGGCTACA
GCCCTCTGTA CCCGCGTGGA ACGCGATTTC CTGCGGACAC TGATGGGTGG TTGTACTACG
CCGATCAGCG CATATGCGAC GATCAGCAAT GAAACAGTAC ACTTCAGCGG AGAACTGTGC
AGCCTGGACG GACAACAGCT CTTTACTATT ACAGAACAGC TCCCCTTACA GGATGCCGGC
GTGATAGGCA GAAGCGCGGC AGAAAAGATC CTCGCACAGG GAGGAGATAA AATTGTTGCT
GAGATAAAGA ATGCCATCAA ATAA
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| Protein sequence | MNREIKIGTR DSQLALWQAN KVKGLLEAQG YSTVLVPIKS EGDIDLVTPL YEIGVQGIFT
KSLDIALLNG RIDIAVHSLK DVPTQLPKNI IQAAVLERGP VKDLLVYRQD TAFLGQPEYI
ANIATSSVRR KAQWLRKYPK HQLHNLRGNV NTRLQKLAAE NWDGAIFAAA GLERIGVRPA
TSIELDWMLP APAQGAVVAV CREDDDFCRQ ACAPFNDLAT ALCTRVERDF LRTLMGGCTT
PISAYATISN ETVHFSGELC SLDGQQLFTI TEQLPLQDAG VIGRSAAEKI LAQGGDKIVA
EIKNAIK
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