Gene Cpin_6498 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6498 
Symbol 
ID8362682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8160112 
End bp8161140 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content46% 
IMG OID644968626 
Productferrochelatase 
Protein accessionYP_003126103 
Protein GI256425450 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0276] Protoheme ferro-lyase (ferrochelatase) 
TIGRFAM ID[TIGR00109] ferrochelatase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.534245 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCTA AATCTGATAA AGGAATTATT CTGATGAACC TCGGGTCGCC GGATTCTACG 
GCAGTACCGG ATGTTAAGCG TTATCTCAAT GAGTTTTTAA TGGATAAACG GGTAATTGAC
TATCCGTATC TGTTCCGCTT AATGCTGATC AAAGGTATTA TAGTGCCAAG GCGTGCGCCT
AAGTCAGCAG AGGCTTATAA ATCCATCTGG TGGGAAGAGG GTTCTCCGTT GATCGCATTG
ACAAAGCAAT TGCAGAACGC TGTACAGCAT GATCTGCAGA TGCCTGTGGA AATCTCTATG
CGTTACGGTA ATCCTTCTCA GGAAGACGCA TATGACAAGC TGCTCAAGCA GAATCCCAAT
CTGAAAGAAG TGATCCTGTT GCCTTTATAT CCGCACTATG CCATGTCTTC TTATGAGACG
GCTGTAGAGC ACGCAAAGGC TGTACATAAG AAAAAGAAGT ATCCGTTTAC TTTAAATATC
GTACCTCCCT ACTACAGCGA GCCTGATTAT ATCAACGCGC TGGCAGAGAG TATGCGTCCC
TATGTGTCGC AGGACTTTGA TCACCTGTTA TTCAGCTATC ATGGTGTACC TGAGAGGCAC
ATACGAAAAG GAGATATTAC AGGAAAACAC TGTCTGCAGG TAGAAGACTG CTGCCATGTC
GGTTCTCCTG CACATGAGTT CTGTTATCGT CACCAGGTAT TTATTACCTC CGAACTGGTA
GCAGAGAAAC TGAAAATACC GAGAGAGAAG TGGAGCGTTA CCTTCCAGTC CCGCCTGGGC
AGGGAAGAAT GGCTGAAACC TTATACTGCC GCTACGCTGG AGGAATTGCC AAAGAAGGGA
GTGAAGCGTT TGCTGGTGGC TTGTCCTGCA TTTGTGTCGG ACTGTCTTGA AACGCTGGAA
GAAATTGCAG TGGAAGGTAA ACATACCTTT ATAAATAGTG GTGGCGACAG CTTTACCATG
ATACCTTGTC TGAATGTACA TCCGCTATGG GTGGGCGCAG TGGTAAAATG GATGACAGCG
ATGTCCTGA
 
Protein sequence
MEAKSDKGII LMNLGSPDST AVPDVKRYLN EFLMDKRVID YPYLFRLMLI KGIIVPRRAP 
KSAEAYKSIW WEEGSPLIAL TKQLQNAVQH DLQMPVEISM RYGNPSQEDA YDKLLKQNPN
LKEVILLPLY PHYAMSSYET AVEHAKAVHK KKKYPFTLNI VPPYYSEPDY INALAESMRP
YVSQDFDHLL FSYHGVPERH IRKGDITGKH CLQVEDCCHV GSPAHEFCYR HQVFITSELV
AEKLKIPREK WSVTFQSRLG REEWLKPYTA ATLEELPKKG VKRLLVACPA FVSDCLETLE
EIAVEGKHTF INSGGDSFTM IPCLNVHPLW VGAVVKWMTA MS