| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6492 |
|---|
| Symbol | |
|---|
| ID | 8362676 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 8153669 |
|---|
| End bp | 8155126 |
|---|
| Gene Length | 1458 bp |
|---|
| Protein Length | 485 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644968620 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003126097 |
|---|
| Protein GI | 256425444 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.799417 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAAAAG ATCAAAATGG AAAATTTACC CCGATAAAGG GAAAACCTTC CGGTAATGGA
AAGGAGGGAT TAGGTTTGAG AAAGTCCATT TCCCCTGATG AGCTGGAAGC AGACCTGGAG
ATGACGGACA AATACACCGT GGGGCCAGAT GAACTGCAGC CAGGCGTCCA TATGCGGCAT
CCCAACAGAG ATACTGCTAA AAAAGCTGTG CAGCAACAGA ACAATCTCAG AGAAGCGCCC
GCTGATAAGA CGTTAGATGA AACGTTTGAT CAACTCCAGC ACAATATTAC TGCTACTGAA
ATTGAAGGCA GAGTCAACAA AAATATCTTT GCGGAACTGG CGGCAGAAAA AGGTAACATA
TGTATTACAC TATATATGCC GACACATGCA TCCGGACAGG CAGTAAATGA GCAACAGGAT
CTGATCTGTT TTAAAAATAT ATTGCAACAG ACACAAAAGC AACTTGAAGA AAAATCAATA
TCACCATTGC AGATACGCCA GTTGTTACAG CCCGGATATG AGTTACTAAA AGAAGAAATG
TTCTGGAAAA ATCAACAGGA CGGACTGGCC TGCTTTATCA CAGAGAACTC TTTCCGCTAT
CTGCGCCTGC CGTTGACTAT GCAGCAACAG ATTTACTGCA ATCATAGCTT TATGTTAACT
CCGCTGCTGC CGGTATTAAC CAGTACCGAA CAATTTTACT TGCTGACCTT CAGCAAACAC
AACGCTAAAT TGTTTCTCGC CGACGCATTT GGAATGAAAG AAGTACCTGT AGAAGGGATG
CCAAATGGTA TGGACGATGT TATACACTTT GAAGAAAAAG GCGATCAGCA GTTATTCCGT
ACAGGAAGCT CTGGTGGTGG TCACGGCGCC AATTATCACG GTATGAATTC CAACCCGGAT
CATAAAACGG ATATCGCAAA TTATCTGGAA GAAGTGGACA AAACCATATG GAAAGAAGTG
CTGCATAACA AGCACATTCC ATTAATCATG GCTGCAGTCG ATTATCTCCA GCCTATTTTC
AGAAAGGTGA CCCGCTATCA GCATGTAGCT GATGAAGCGC TTACTGGAAA TTTTGAACAT
GAGAAAGCGA CAAAAATTTA CAGGCAGGCC AGAGAGAAAA TGCAGCCATT TTTTGAGAAA
AGGAAGGAGC AGGCTTTAGA TAAATACAAT AACGGATCAA CCAGTGCATT AACGGCATCC
ATTCCGGATG ATGTTATACC TGCTACCTAT TACGGTCAGG TAGATTGTTT ATTCGTTGAA
AAGAATGCAC AACTATGGGG TACCTTCGAT GAGAAAGAAA ACAGGGTGAT TATACACGAA
GCGCAACAAC CCCAGGACGA ATGCCTGCTG AATAACGCCA TCACCCAAAC CATTCTCCAC
AATGGCGATG TGTTCATTCT GGAGAAAGAC AAAATGCCAG CTGAGAGCAG TATAGCTGCT
TCATTGCGCT ATGCATAA
|
|---|
| Protein sequence | MPKDQNGKFT PIKGKPSGNG KEGLGLRKSI SPDELEADLE MTDKYTVGPD ELQPGVHMRH
PNRDTAKKAV QQQNNLREAP ADKTLDETFD QLQHNITATE IEGRVNKNIF AELAAEKGNI
CITLYMPTHA SGQAVNEQQD LICFKNILQQ TQKQLEEKSI SPLQIRQLLQ PGYELLKEEM
FWKNQQDGLA CFITENSFRY LRLPLTMQQQ IYCNHSFMLT PLLPVLTSTE QFYLLTFSKH
NAKLFLADAF GMKEVPVEGM PNGMDDVIHF EEKGDQQLFR TGSSGGGHGA NYHGMNSNPD
HKTDIANYLE EVDKTIWKEV LHNKHIPLIM AAVDYLQPIF RKVTRYQHVA DEALTGNFEH
EKATKIYRQA REKMQPFFEK RKEQALDKYN NGSTSALTAS IPDDVIPATY YGQVDCLFVE
KNAQLWGTFD EKENRVIIHE AQQPQDECLL NNAITQTILH NGDVFILEKD KMPAESSIAA
SLRYA
|
|---|
| |