Gene Cpin_6465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6465 
Symbol 
ID8362649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8122063 
End bp8123598 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content46% 
IMG OID644968593 
Producthypothetical protein 
Protein accessionYP_003126070 
Protein GI256425417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.404265 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATGC GCTTTAACTT TCTCATATAT ACAGCAGTCG CTTCTATGCT GACTTTTCAA 
TCCTGTGATA AAGGATTCGA AGAAATGAAC ATCAACCCGG ATGCATCTAC TACTGTACAG
CCTGAATATA TGTTCAGTAA GGCTTTACTG GATGCGTTTG GTAACAGTTA CTTCGCTACT
GATGTACTGG CTTGTGGTGG CTCTATGCAG CATTTCGCTA CTTATAAAGA TGTACCAGGT
ATCGGTGATA AATATTATTT CCAGCAGGGT ACTTATCCTT ATGATTATTT CACAACCGGA
TATACTACAG CGGTAAACGA AATCGGTACT ACGATCAATG CATTGAATCC TGATGCGCCT
GCAGATGTGA ATAAACATGC CATCGCACGT ATCTTCCGTG TGTATATCAT GCACCGCCTT
ACTGATCTCT ATGGGGATAT TCCTTATTCC GCGGCAGTAA AAGGGTATAC GGAGAATGAT
TTCACACCGG CATATGATAC ACAGGAAGCT ATCTATAACG ATATGCTGAA AGAGCTGGAT
GAAGCGGCCG CAAAACTGAA TCCTGCTACA GCTACTTTCG GTGCGGGTGA TTTTATCTAT
TCCGGTGATG TAACAAGATG GAAGAAATTC GCTTATTCCC TGATGTTACG TCTGGGTATG
CGTATCTCCA GAAAATCTCC TGCTGTAGCG CAAACCTGGG TGAAGAAAGC GATTGATGGC
GGTGTGGTTA CAACAGATGC AGATATCGCT ACCATGAAAT ATGTAGATGG TTCACAGGCG
ATCAACCGTA ATCCGGCTGC TGCCAGTATG TTGTCCAATG ACTATGCAGT AGCGAACGGT
AACAGCAATA CCGAAGGTGG TAAGCTGGCG CAGACCTTCA TCGATGTGCT GAAAACGAAT
AAAGATCCCC GTCTGAATGT AATAGCAATC GTATGGAACA ATGGTAAAGC AGACACCAGT
ACAGCTTTGC AGAAGGGAAT GCCCAATGGT TTGCTGAATA AACCAACTGA TTTTCCAAGC
CTTTCCGAGC CTAATCCGGC TACTATTTTA CAATACAATG CACCGTTTAT TATCATCAGT
GCTGCTGAAG TAAATCTGCT GCTGGCAGAA GCTGCTGTAC AGGGATGGTG GGAAGGAAAC
GCTGCTACTG CTTTCTCCAA TGCAATAGGC GCTTCTATGC GTAACTGGGC ATTGTTCGGT
AGCGGAGGGG TGATTGCATC GGAAAAGATT ACCGCTTATC AGGCGGCACA TCCGCTGACA
GGTAGCGCAG AAGCGATGAA AGCAATGATT GGTCAGGAGA AATGGGTAGC GTTATTCCTG
GACGAACAGG AGATACATGC CAACTGGCGT CGTACCGGTT ATCCAGCACT GACACCGGTG
AATGTAGCTG GTAATACAAC GGGTGGTACT ATTCCACGTC GCCTGCTGTA TCCACCTTCT
GAAGAAAGTG TGAACAGTGA AAGCCTGGCT GAAGCTATCA GCCGTCAGGG AGCGAATCTT
ATGACAACCC GCGTATGGTG GGATAAAAAT AACTAA
 
Protein sequence
MKMRFNFLIY TAVASMLTFQ SCDKGFEEMN INPDASTTVQ PEYMFSKALL DAFGNSYFAT 
DVLACGGSMQ HFATYKDVPG IGDKYYFQQG TYPYDYFTTG YTTAVNEIGT TINALNPDAP
ADVNKHAIAR IFRVYIMHRL TDLYGDIPYS AAVKGYTEND FTPAYDTQEA IYNDMLKELD
EAAAKLNPAT ATFGAGDFIY SGDVTRWKKF AYSLMLRLGM RISRKSPAVA QTWVKKAIDG
GVVTTDADIA TMKYVDGSQA INRNPAAASM LSNDYAVANG NSNTEGGKLA QTFIDVLKTN
KDPRLNVIAI VWNNGKADTS TALQKGMPNG LLNKPTDFPS LSEPNPATIL QYNAPFIIIS
AAEVNLLLAE AAVQGWWEGN AATAFSNAIG ASMRNWALFG SGGVIASEKI TAYQAAHPLT
GSAEAMKAMI GQEKWVALFL DEQEIHANWR RTGYPALTPV NVAGNTTGGT IPRRLLYPPS
EESVNSESLA EAISRQGANL MTTRVWWDKN N