Gene Cpin_6420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6420 
Symbol 
ID8362604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8066750 
End bp8067610 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content47% 
IMG OID644968548 
Producthypothetical protein 
Protein accessionYP_003126025 
Protein GI256425372 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.06619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGGAA TGTATACAAA AATCATCGCT GCTGTCGGCC TCCTGGCCCT GAGCACAGCG 
GGGTGCGACA GCAGTAATGC CGGTAAGGAG GAAAAAAAGG AACAGACAAT AGCCGCTGCG
GAAACAGTGA CCATTAAGAA TGATGAACTG TATCCGTTCA TGCTGGCAGG TGTTTATTTT
GTACATGGTT ATGGCGGGCC TACCCATACC TTCGATGGAC TGATCAAGCC AGCTGTAAAG
AGTGAACCGG GAACAGCGGA TTTCTCAAAA GAAATGCAGG CAGCCTACAG CCGTTATTTC
ATTTTCCCTT TTAAACCGGG AGATGCTGCA GGTGAAAAAG ATGCGAAAGC TACACTGGCG
GAGTACTGGG ATATTCATAA TGTAGCCGGA CTGGAAAAAT CCCTGACCTG GTTACTGGAT
GAAGGTCATC AGGCACAATA TGCCCAATAT CGTAAAGTAC TGGACGAAAA CGGTGGTGCA
TCTGCCGATC TGAATACGCT CGATCTTAAT AAATACAAAC TGACAAAGGA AGACCTTGCA
GGTATACAGT TTATTAAAGA TCATTATACT TCCTTCAGCA GTGCCGGTAT CAAGGCGTGG
GACCTGGCGC GGTATATTAA TAATATATGC GTAGCCTACC AGGCAGGTTA TTTTAACAGG
GGCGAAGCAA TGGCATGGCT GATGAAAGCG CCACAGGTAG CACAGGCCCG TTATAGCGAC
TGGAAAGCCT ATTTTAATGA CTTCCTGCTC GGCCGTGAGT TCTGGGGTGG CGGAGAGGCT
GATAATGCCA GATTTAAAGA AGAAGTGACA GGTATGCTGG AAGGAAAGTA CAGCATCTAT
AGTTATATGC CGGTGAAATA A
 
Protein sequence
MKGMYTKIIA AVGLLALSTA GCDSSNAGKE EKKEQTIAAA ETVTIKNDEL YPFMLAGVYF 
VHGYGGPTHT FDGLIKPAVK SEPGTADFSK EMQAAYSRYF IFPFKPGDAA GEKDAKATLA
EYWDIHNVAG LEKSLTWLLD EGHQAQYAQY RKVLDENGGA SADLNTLDLN KYKLTKEDLA
GIQFIKDHYT SFSSAGIKAW DLARYINNIC VAYQAGYFNR GEAMAWLMKA PQVAQARYSD
WKAYFNDFLL GREFWGGGEA DNARFKEEVT GMLEGKYSIY SYMPVK