Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6420 |
Symbol | |
ID | 8362604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 8066750 |
End bp | 8067610 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644968548 |
Product | hypothetical protein |
Protein accession | YP_003126025 |
Protein GI | 256425372 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.06619 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGGAA TGTATACAAA AATCATCGCT GCTGTCGGCC TCCTGGCCCT GAGCACAGCG GGGTGCGACA GCAGTAATGC CGGTAAGGAG GAAAAAAAGG AACAGACAAT AGCCGCTGCG GAAACAGTGA CCATTAAGAA TGATGAACTG TATCCGTTCA TGCTGGCAGG TGTTTATTTT GTACATGGTT ATGGCGGGCC TACCCATACC TTCGATGGAC TGATCAAGCC AGCTGTAAAG AGTGAACCGG GAACAGCGGA TTTCTCAAAA GAAATGCAGG CAGCCTACAG CCGTTATTTC ATTTTCCCTT TTAAACCGGG AGATGCTGCA GGTGAAAAAG ATGCGAAAGC TACACTGGCG GAGTACTGGG ATATTCATAA TGTAGCCGGA CTGGAAAAAT CCCTGACCTG GTTACTGGAT GAAGGTCATC AGGCACAATA TGCCCAATAT CGTAAAGTAC TGGACGAAAA CGGTGGTGCA TCTGCCGATC TGAATACGCT CGATCTTAAT AAATACAAAC TGACAAAGGA AGACCTTGCA GGTATACAGT TTATTAAAGA TCATTATACT TCCTTCAGCA GTGCCGGTAT CAAGGCGTGG GACCTGGCGC GGTATATTAA TAATATATGC GTAGCCTACC AGGCAGGTTA TTTTAACAGG GGCGAAGCAA TGGCATGGCT GATGAAAGCG CCACAGGTAG CACAGGCCCG TTATAGCGAC TGGAAAGCCT ATTTTAATGA CTTCCTGCTC GGCCGTGAGT TCTGGGGTGG CGGAGAGGCT GATAATGCCA GATTTAAAGA AGAAGTGACA GGTATGCTGG AAGGAAAGTA CAGCATCTAT AGTTATATGC CGGTGAAATA A
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Protein sequence | MKGMYTKIIA AVGLLALSTA GCDSSNAGKE EKKEQTIAAA ETVTIKNDEL YPFMLAGVYF VHGYGGPTHT FDGLIKPAVK SEPGTADFSK EMQAAYSRYF IFPFKPGDAA GEKDAKATLA EYWDIHNVAG LEKSLTWLLD EGHQAQYAQY RKVLDENGGA SADLNTLDLN KYKLTKEDLA GIQFIKDHYT SFSSAGIKAW DLARYINNIC VAYQAGYFNR GEAMAWLMKA PQVAQARYSD WKAYFNDFLL GREFWGGGEA DNARFKEEVT GMLEGKYSIY SYMPVK
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