Gene Cpin_6409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6409 
Symbol 
ID8362593 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8053335 
End bp8054147 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content45% 
IMG OID644968537 
Producthypothetical protein 
Protein accessionYP_003126014 
Protein GI256425361 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAACA GTTTAATATA TACATTACTA GGCTCGGCGC TGTTGTTGGG CACAGCCTGT 
GAAAAAGAGA TCGATCTCAA CCTGAACGGT AACGACGACA AGTTAGTGAT CGAAGGTGTA
CTGACTGACA GCAAAGGCGC ATGTAGCGTA AAGATCAGCC GTACCAAAAC GTTCGGTTCA
AATAATGATT TCAACGGTGT ATCCGGTGCA AAAGTGCAGA TCTGGACTGG TACAGATACC
ACCCTGCTGA CTGAAACAAG TGAAACAGGT GTTTACATCG CTTCTGAACT GTCAGGCGTA
AGCGGCACCA CTTACGGATT GCTGGTGACC CTCGACGGAG AGCAATACAC GGCTACTTCC
CGTATGCCAT CAAAAGTTCC TTTTGATGCA TTATCAACTG TTGAAGAAGA TCTGTTTGGC
GACATGACCA AAATCGCCAA TGTCAACTTC AGAGATCCTG CAGCAGAAAC AAATTACTAT
CGTTTCCGTC AGTATATCAA TGGTAAAATG ATCAAGAGTT ACTGGGTAAG AAATGATGAT
CTGACCAATG GTAATGAGAT CAACGCACGT CTTTACATCC TGGGGCAGGA TGATGACGAC
GAAACGCTGA AGATCCACTC TAAAGATGAA GTGACCGTGG ATATGATGAA CATCGATGCA
GATGTATACA AGTACTTCTT CAGTTTGAGC AACAGTGCTA CCGGTGAAAG CAATTCCGCT
ACACCAGCGA ATCCTGTCAG CAATATCAAG GGAAATGCGA TTGGCTATTT CAGTGCGCAT
ACCCAGGAAA CGAAGACGAT TATCGTGCCC TGA
 
Protein sequence
MRNSLIYTLL GSALLLGTAC EKEIDLNLNG NDDKLVIEGV LTDSKGACSV KISRTKTFGS 
NNDFNGVSGA KVQIWTGTDT TLLTETSETG VYIASELSGV SGTTYGLLVT LDGEQYTATS
RMPSKVPFDA LSTVEEDLFG DMTKIANVNF RDPAAETNYY RFRQYINGKM IKSYWVRNDD
LTNGNEINAR LYILGQDDDD ETLKIHSKDE VTVDMMNIDA DVYKYFFSLS NSATGESNSA
TPANPVSNIK GNAIGYFSAH TQETKTIIVP