| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6408 |
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| Symbol | |
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| ID | 8362592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 8051011 |
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| End bp | 8053329 |
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| Gene Length | 2319 bp |
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| Protein Length | 772 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968536 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003126013 |
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| Protein GI | 256425360 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAA AATTGTTGCT GATTGCTGTC TCGCTGATGG CCCTGCAAGC CACGGCACAG
CAGAAACACA CAATTAGCGG AACCATTAAA TCCAAAGCCA AAGGCGAAAC CCTGATCGGC
GCTACCGTGA GAGTCAGCGG TGGCGGAGGA ACCACCACAA ACGAATACGG GTTTTACTCC
ATCACCATCA CAGATGGCAA ACACAAGCTC GAATTTACCT CTATGGGCCT TCAGACAAAC
AGCCTGGAGT TTACCCTGCG GAAAGACACT ACCATTAACA TATCCCTGGA AGACGAATCG
GTTTCCCTGG GCGCTGTAAC TGTTACCGGC ACCAGCACAA AAAGAAGCCT CGCCGCCCCT
CAGATGGGTC TGGAGAAGCT GACAGCCAAG GAGATGAAGA ATGTACCCGT CCTCCTCGGT
GAAAGAGACG CTATTAAAGT TATCCAGTTA CTGCCCGGTA TCAAGTCAGC CGGTGATGGT
AACGCAGGTA TGTACGTACG TGGCGGCGCT GCCGACCAGA ACCTGATCCT CCTGGATGAA
GCGCCGGTAT ACAACGCGTC TCACCTGCTG GGTTTCTTCT CCACATTCAA CTCAGACGCG
ATCAAGGATA TCGCGGTATA TAAAGGCGGT ATGCCTGCCC AATATGGCGG CCGACTGTCC
TCCGTACTGG ATATCAAGAT GAATGATGGT AATAACCAGG ATTTTGGCGT AAGTGGCGGT
ATCGGCCTCA TCTCAGCCAA ACTGAACGTG GAAGGTCCTA TCCAGAAGGA TAAATCCTCC
TTCCTCGTCA CAGGCCGCAG AACATATGCA GATGTGTTCC TGAAATTGTC CAATGATTCC
AGTATCAATA ACAATAAACT CTACTTCTAC GATATCAATG CCAAGTTGAA CTATGAACTG
GGCGACAAGG ACAAACTGTA CCTCTCCGGC TACTTCGGAA AGGATAAACT GGGTGTAGGC
GATCTCTTCG GTCTGTCATG GGGTAATACC ACCGGTACCC TCCGCTGGAA CCACATTTTC
AGTAACAAAT TGTTCTCCAA CACCTCCCTG ATATACAGTA ACTACGATTA TACAGTATCT
ATCAACAGTG GTTCGGTGAA TGCAGATATC TACTCCAAAA TCAGGGATTA TAACCTGAAA
CAGGAGTTCC AATGGTATCC TTCTTCCAGC CATAACATCC GTTTTGGTTT CAACAGTATC
TATCACACCA TCACACCGGG TCAGGTAACT ACCTCTGAAA CTTCTCAGAT CAATGCCAGA
TCGCTGGAAG ACCGCTACTC CTGGGAGAAT GCCGTATATG CGACTGACAG CTGGAAAATG
TCTGAAGCGC TCAGCATGAC CTATGGTCTG CGTGTCTCTT CTTTCAGCGT ACTGGGTAAA
GGTGATTTCT TCAACATTGA CCAGGATGGT AAAATACTGG ATACCCTGCA CTACAAAAAA
GGCGATTTCG TAAAAACTTA TGTCAACCTG GAACCAAGAC TGGCCATCAG CTACAAACTG
AATGCTACCT CTTCCGTGAA AGGTTCATAT GTACGTAATA CACAGAACCT GCACCTGATC
TCCAACAGTA CAACCAGCAG TCCGACCGAT AAATGGGTGG CCAGCACAAA TATTATCAAA
CCGGAGATCT CTGATCAGTT CTCCGTTGGC TACTACAAAG ACCTCTTTGG TGGCGACTAT
GAACTGACGG TTGAAACCTA CTACAAATCA TTGCAGAACC AGATCGATTA CCGGGATGGC
GCCAATGTGA ACTCTGTCAG CAATGCGATC GAATCTGAAC TGCTGTTTGG TAAAGGACGC
GCTTATGGTA TCGAATGGCT GTTCAAAAAG AGAGTAGGTA AATTCAATGG TTGGGTGAGC
TACACGCTGT CCAAGACCGA AAGAAAGATC GATGGTATCA ATAACAACGA ATGGTACAAT
GCCCGTCAGG ACAGAACACA TGACATTGCG ATCGTAGCCA TATACCAGCT GAGCCCTAAA
TGGACCCTCT CTGCTAACTG GATCTATTAT ACAGGTGATG CAGTGACCTA TCCATCCGGT
AAATACAATG TTGACGGACA AACCGTTTAC TACTACACCG GCCGTAACGC TTACCGTATG
CCAAACTATC ACCGTCTGGA CCTCGGCGCT ACCTTACAGC TGAAGAAACG TAAACGCTGG
TCTTCCGAAC TGGCTTTCAG TCTCTATAAT GCCTATGGCA GAGAGAATGC ATATACCATC
ACATTTGAAG ACAGCAAGGA TGATCCGACT AAAACAGTGG CTAAACAGAC TGCATTATTC
AAATTCATTC CTTCTATCTC TTACAACTTT AAGTTCTAA
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| Protein sequence | MKSKLLLIAV SLMALQATAQ QKHTISGTIK SKAKGETLIG ATVRVSGGGG TTTNEYGFYS
ITITDGKHKL EFTSMGLQTN SLEFTLRKDT TINISLEDES VSLGAVTVTG TSTKRSLAAP
QMGLEKLTAK EMKNVPVLLG ERDAIKVIQL LPGIKSAGDG NAGMYVRGGA ADQNLILLDE
APVYNASHLL GFFSTFNSDA IKDIAVYKGG MPAQYGGRLS SVLDIKMNDG NNQDFGVSGG
IGLISAKLNV EGPIQKDKSS FLVTGRRTYA DVFLKLSNDS SINNNKLYFY DINAKLNYEL
GDKDKLYLSG YFGKDKLGVG DLFGLSWGNT TGTLRWNHIF SNKLFSNTSL IYSNYDYTVS
INSGSVNADI YSKIRDYNLK QEFQWYPSSS HNIRFGFNSI YHTITPGQVT TSETSQINAR
SLEDRYSWEN AVYATDSWKM SEALSMTYGL RVSSFSVLGK GDFFNIDQDG KILDTLHYKK
GDFVKTYVNL EPRLAISYKL NATSSVKGSY VRNTQNLHLI SNSTTSSPTD KWVASTNIIK
PEISDQFSVG YYKDLFGGDY ELTVETYYKS LQNQIDYRDG ANVNSVSNAI ESELLFGKGR
AYGIEWLFKK RVGKFNGWVS YTLSKTERKI DGINNNEWYN ARQDRTHDIA IVAIYQLSPK
WTLSANWIYY TGDAVTYPSG KYNVDGQTVY YYTGRNAYRM PNYHRLDLGA TLQLKKRKRW
SSELAFSLYN AYGRENAYTI TFEDSKDDPT KTVAKQTALF KFIPSISYNF KF
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