Gene Cpin_6384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6384 
Symbol 
ID8362568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp8024592 
End bp8025836 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content45% 
IMG OID644968512 
ProductKWG repeat protein 
Protein accessionYP_003125989 
Protein GI256425336 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.926635 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCG TATATTTTCT CCCTGTCCTG CTGATCAGCT TATGGTGCAA GGCACAGGAC 
GGTCTCTATC CCTATGCTGA AAAAGGGAAA TGGGGACTTA CCAACAAGAA ACATGCAGTC
GTACTTGAAC CACAATTTGA CAGTATTCAG CTGTTCCAGG GAGATTATGC CCGTGTGGAA
AATAACAGAA AGGTAGGATT GATCAATGGC TCCGGCAAGA TCATCTACCC TTGTACATAC
AATGATATGC CAATCGTTGC TCCGAATGGG ATGGCCGTTG CAAAAACCAT CAAAGGTTAT
ATCCTGCTGG ACCCGGCAAC CGGCAAACAG AAAGGATCCC TGGTATTCGA TGAAATACCT
AGTATCAATC CGCTTTCCAA AGCCACCAAT CTCCTTGTTG TTAAGAAAGA AGGTACTATC
GGTCTCGTAG ATATGAACAC CGGTAACCTG GTGAATAAAA CACTCAAATT TGATGATGGC
GAATTCTTTG AAGAACCATC ACTCAAAAAT TTCCTGATCG TTGCACTGGA TGGTAAATAC
GGTGTAATAG AAACATCCAA TGGCAAAGAA GTGATCCCTG CTACTTACGG AGAGATCAAA
AGTGCTACCG ATGGTTCACA GGACCTGATC AAGGCCATTA CAGACGACGA ACGTGTAGTA
TACTTTGATG CCAGTGGTAA AGTCGCTCCT GCTTCAGTAG CCAAAGCGGC ACAAAAAGTC
GAGGAAAGCA CTAACCATGA CGCTGCCGCC CTTGAAGGTT CCGAAGAGAA AAAAGATATG
CGTATCTACA AAATCCCGGG TGGTAAATGG AGAGTAGTAA TTGAGATCGG TGAATTCCAA
CGTCCGGGCA GAGCACTGGA CAGCGTTGAA TTCAATGGCT ACTCAACACT GGAATACCTG
TCTTACCGCG AAGCACAACC TATCCCTGGT ATGATCAAAG CCGTGAAAGA CAACAACACA
GGCGTGATCG ATCTGAAAGG TAATGTGATC GTTCCATTGA TCTATGATGA TGTGAAATAC
AGAGAAGATA ACTTTGGTCA CTATGCCTTC ATCGAAACAA GGGTAGGTAA CCGCGTAGGG
ATCATTCCTG TCGAAACCAT GAAGGAACTG AAAAAGCCCG TACTGGCACA GGTGATCGAT
GAAGATGTTA ACCGTAAGGC ATTACTGGTA CAAACTGCCG GTGGTACAAG AGGATACATG
GACAAAACTA CAGGCGAGAT CTATATTCCC GGATACAGAG ACTAA
 
Protein sequence
MKTVYFLPVL LISLWCKAQD GLYPYAEKGK WGLTNKKHAV VLEPQFDSIQ LFQGDYARVE 
NNRKVGLING SGKIIYPCTY NDMPIVAPNG MAVAKTIKGY ILLDPATGKQ KGSLVFDEIP
SINPLSKATN LLVVKKEGTI GLVDMNTGNL VNKTLKFDDG EFFEEPSLKN FLIVALDGKY
GVIETSNGKE VIPATYGEIK SATDGSQDLI KAITDDERVV YFDASGKVAP ASVAKAAQKV
EESTNHDAAA LEGSEEKKDM RIYKIPGGKW RVVIEIGEFQ RPGRALDSVE FNGYSTLEYL
SYREAQPIPG MIKAVKDNNT GVIDLKGNVI VPLIYDDVKY REDNFGHYAF IETRVGNRVG
IIPVETMKEL KKPVLAQVID EDVNRKALLV QTAGGTRGYM DKTTGEIYIP GYRD