| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6357 |
|---|
| Symbol | |
|---|
| ID | 8362541 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7992211 |
|---|
| End bp | 7993302 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644968485 |
|---|
| Product | protein of unknown function UPF0118 |
|---|
| Protein accession | YP_003125962 |
|---|
| Protein GI | 256425309 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTTACC GTACAAAAGC TATCAATGCT GCTGCTATTC TGATGATATT AACACTGGTT
GTGCTGATCC TGGTTTATGG GAAACCCTTC TTTGTTCCTA TCGCATTTGC CGGACTTTTA
GCTATGTTGT TATTGCCCGT CAGTAAGTGG TTGTGTACAA AAGGTATAAA TAACGCAGTG
GCCATCCTGT TGTCTTTATT ACTTTTTGTT GGATTCCTGG TGCTGGTGGT ATTATTTGTG
AGCTGGCAGG TATCAGACAT TGCAGAGAAT GCCTCACAGC TGGAGCAACA AATGATGGAA
AAGTATCAGC AGTTAAGGGG ATGGTTAAGT ACTGAATACG GGATTAGTCA GGAGAAACAG
GCGCAAATGC TCAAAGAACA GCAGGAATCT TCCGCTGGTA AGGCCAGTTC GGTGTTGACA
GGTATTATCA GCGGATTTGG CGGTTTTCTG ACTGATTTTT TGCTGGTATT GGTATACGTG
TTTTTATTTA CTTTTTTCAG GGGGCGTATC AAGGGATTTA TCGTGCGTTT GGTGCCACAT
AGTGAAAAAG AAAAGGCAGT GGCTTGTATG CATAAGACGC AGGAAACAGC ACAGCAATAT
CTGAAGGGCT TGTTGTTGAT GATCATCTTC CTGTGGGTGA TGTATGGCAT TGGATTTACT
ATTGTCGGTG TAAAGAATGC TTTCTTTTTC GCCATTCTTT GTGGCCTGCT GGAGATCATT
CCATTCGTAG GTAATCTTAC GGGAACAGCA TTAACCTTGT TGATGTCTTT GGTACAGGGT
GGAGACATGA CGCTGGTAAC AGGCATTCTG ATCACTTATG GACTGGTACA GTTTATTCAG
TCTTACCTGT TAGAGCCGCT GGTAGTAGGT TCTGGTGTAG ACATCAATCC GATGGCGACA
ATTGTCGGAT TAGTAGCGGG GGAATTGTTG TGGGGCATTC CAGGCATGGT GATGGCGATT
CCATTGATGG GCATGATGAA GGTGATTTTT GATCATATAC CTGTGATGCA GCCGTATGCT
TATTTGTTGG GGCAGGATAA GAAAGAGAGT GGCGGTTTGA AAAAATGGGG GAAGATTTTC
AAAAGATCGT AA
|
|---|
| Protein sequence | MIYRTKAINA AAILMILTLV VLILVYGKPF FVPIAFAGLL AMLLLPVSKW LCTKGINNAV
AILLSLLLFV GFLVLVVLFV SWQVSDIAEN ASQLEQQMME KYQQLRGWLS TEYGISQEKQ
AQMLKEQQES SAGKASSVLT GIISGFGGFL TDFLLVLVYV FLFTFFRGRI KGFIVRLVPH
SEKEKAVACM HKTQETAQQY LKGLLLMIIF LWVMYGIGFT IVGVKNAFFF AILCGLLEII
PFVGNLTGTA LTLLMSLVQG GDMTLVTGIL ITYGLVQFIQ SYLLEPLVVG SGVDINPMAT
IVGLVAGELL WGIPGMVMAI PLMGMMKVIF DHIPVMQPYA YLLGQDKKES GGLKKWGKIF
KRS
|
|---|
| |