| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6276 |
|---|
| Symbol | |
|---|
| ID | 8362458 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7910450 |
|---|
| End bp | 7911610 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644968404 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003125883 |
|---|
| Protein GI | 256425230 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.639156 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGTC TGATATTCCT GCTGCTCCTT TCTTTCATCT GGATCGGCAG TATCATCTGC
TCTGCATGGC GTCCTCCTGC TGTACCACAG GAAATGCCCG CATTTGCCGG TTCGGAAGCC
TGTAAATCCT GTCATCGCGA TATCTTCAAT GATACACGTC ATACGGCCCA CTATCTTAGT
TCCGCTTTAC CCGATGATGC GCATATCAAA GGCAGCTTTG CTGCCGGCAA AAATGAATTT
GTGTATAATC AGTGGATGGT ATTGGTACTG GAAAAGAAGA AAGATCTTTT CTTGCAGACC
GCCTACATGA ATGGTATTCC TACAGAACAA CGCGCTTTCG GTCTGGTCAT CGGCTCAGGC
AGAAAGGGAC AGACATATCT CTATTGGGAT AAAAATAACC TGTATCAGTT ACCCGTCTCT
TATTACGCTC CTGCTAATGA CTGGTGCAAT AGTCCGGGAT ATCCGCTGAA TTACATCCGT
TTTTACAGAC CTATCCCTGC TACCTGCCTG GAATGTCATG CCAGTTATGC TGCAGCACAG
GTAAAGAAAG ACGGGAGTAC CAGTTTCAAT AAGAAATCTA TCCTATATGG TATCGACTGT
GAAAGATGCC ATGGCCCGGC AGCTGCACAT GTGGCTTTTC ACACACAGCA TCCGGATGAA
AAGGCAGCCA ATAGTATCAT CAGTACCAAA CAGCTGTCAA GACAGCAACG TCTCGATGCC
TGTGCTTTGT GTCACTCCGG CTTAAGGAAG CAATTACAGC CTGCTTTTTC ATTTACGGTC
GGACAAAGAC TTGACGACTT TTCAGTGCCG AATTATGATG TAGATACTGC CGGCGGACTG
GATGTACACG GTAACCAATA CGGTCTGCTG ACTGCCAGCA AATGCTTTAA GATGTCCGCA
CAACTTGATT GTAGCTCCTG TCACAACGTA CATATCAACG AGAGACATGA TATGGCTACG
TTCTCACAAC GTTGTCTCAA TTGCCATGCT ACACATGATA CGTGTACAGT GAAGGCATCC
GCAGGTGTGA TGTTAAAGGA TAATTGTATC GACTGCCATA TGCCGCAATT GCCTTCAAAG
AAGATCACCT TGAAACTTGC CAGTGCAACG GCTGTTACGC CGGATCTTGT GCGTACACAC
CGTGTCGGGA TCTACCCATA A
|
|---|
| Protein sequence | MKGLIFLLLL SFIWIGSIIC SAWRPPAVPQ EMPAFAGSEA CKSCHRDIFN DTRHTAHYLS
SALPDDAHIK GSFAAGKNEF VYNQWMVLVL EKKKDLFLQT AYMNGIPTEQ RAFGLVIGSG
RKGQTYLYWD KNNLYQLPVS YYAPANDWCN SPGYPLNYIR FYRPIPATCL ECHASYAAAQ
VKKDGSTSFN KKSILYGIDC ERCHGPAAAH VAFHTQHPDE KAANSIISTK QLSRQQRLDA
CALCHSGLRK QLQPAFSFTV GQRLDDFSVP NYDVDTAGGL DVHGNQYGLL TASKCFKMSA
QLDCSSCHNV HINERHDMAT FSQRCLNCHA THDTCTVKAS AGVMLKDNCI DCHMPQLPSK
KITLKLASAT AVTPDLVRTH RVGIYP
|
|---|
| |