| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6272 |
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| Symbol | |
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| ID | 8362454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7904571 |
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| End bp | 7906019 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644968400 |
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| Product | protein of unknown function DUF1080 |
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| Protein accession | YP_003125879 |
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| Protein GI | 256425226 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00000049717 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTACTTA GATCGAAGAA TCATGCAAGC CGGTCTCTGA TGGGCATCTT GTGTCTCTGT
GGTGTGGGGA TGACCGTAGC CCATTCTGCT GCTGCGCAGA CAGGCAAACT GCCATTGCAG
GACCTATCCG CTTTCCGCGA GCCCGGCCAG AGCTGGAGTA TCACCAGTGA TGCCTCCGCA
AAACTGGACA ATCCGCACGT ACTGGACGCT GTAGCTGGTA CAGGAGTATT ATTTAACATG
CCGGATAAAA AACATCCGGG AAAAGACCTT TTCTCCAGCG CTGAATTTGG CGATGCAGAT
ATTGAGCTGG ACTACATGAT GGCGCCAGGT TCAAACTCTG GTATTTATCT GCAGGGCAGG
TATGAGATCC AGTTGCTGGA CAGCTGGGGT ACCAAAGCGC CTAAAGCAGG TGATAATGGT
GGTATCTATG AGCGTTGGGA TGATAGTCGT CCGAATGGTC TGCAGGGATA CGATGGCCAC
GCGCCACGTG TAAATGCCAG CAAAGCGCCA GGTACCTGGC AGCATATAAA GATCTCCTTT
ATTGCTCCCC GTTTTGACGC TACGGGCAAA AAGATCGCAA ATGCGCGTAT GCTGCTGGTA
GAACTGAATG GTGTGACCAT CCAGGAAAAC GTAGAACTGA TGGGCCCAAC CCGTGGCGCT
ATTGGTGGTG GCGATGAAAA AGCAACCGGT CCTTTACGCC TTCAGGGTGA CCATGGCGCG
GTTGCTTTCC GCAATATCGT GATCAACAAA CCAGATGTTT CCCGTCCGTC AAACGAAAGA
GACAGAGGGG TAGATCCTAT CCTGGTAGAT GCACCGGTAA ACACTTTACT GCGCAGCTTC
ATGGATGTAA AAGATAATTA CCGTATCGTT CACGCGATCT CTGTAGGCTC TCCTGAAAAA
GTACATTACA CTTACGACCT GGATAAAGGT ATGATTGCGC AGGTATGGCG TGGCGAATTC
CTCGATGCTA CCCCAATGTG GCATGAAAGA GGTAATGGCT GCTCCCGTCC GCGTGGTGCA
GTACAGTTCC TGGGTAAATC TTACTTCACA CTGGGTAAAC TCGCTTCTCC GCAGGCTGCC
TGGACGACAG ATACCACCGG TTCCGGTTTC CGTCCAAAAG GATATGTACT GGATGAAAAC
GATCTGCCTA CTTTCCGCTA CCAGGTATAC GGTACTTCCG TATCGGATGT GGTACGTGTG
CTGAGCGAAG GTCGTGGTAT TCACCGTGAA CTGTCAGTAG CTGCTCCTGT TGAAGGACTA
TACGCTAAAC TGGCGGAAGG TGCTGCGATA GAAAATCCTT CCAAAGATTT GTATGTAATA
GATGGTAAAT CGTATTACCT GCAGCTCGAA GATGCAGGTG GTGAGAAACC TGTTATCCGT
GACGGTGCAG GCGTAAAAGA ACTCATCATC CCTGTTCGCA GTAAACTGAG TTATTCCATC
CTTTTCTAA
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| Protein sequence | MLLRSKNHAS RSLMGILCLC GVGMTVAHSA AAQTGKLPLQ DLSAFREPGQ SWSITSDASA
KLDNPHVLDA VAGTGVLFNM PDKKHPGKDL FSSAEFGDAD IELDYMMAPG SNSGIYLQGR
YEIQLLDSWG TKAPKAGDNG GIYERWDDSR PNGLQGYDGH APRVNASKAP GTWQHIKISF
IAPRFDATGK KIANARMLLV ELNGVTIQEN VELMGPTRGA IGGGDEKATG PLRLQGDHGA
VAFRNIVINK PDVSRPSNER DRGVDPILVD APVNTLLRSF MDVKDNYRIV HAISVGSPEK
VHYTYDLDKG MIAQVWRGEF LDATPMWHER GNGCSRPRGA VQFLGKSYFT LGKLASPQAA
WTTDTTGSGF RPKGYVLDEN DLPTFRYQVY GTSVSDVVRV LSEGRGIHRE LSVAAPVEGL
YAKLAEGAAI ENPSKDLYVI DGKSYYLQLE DAGGEKPVIR DGAGVKELII PVRSKLSYSI
LF
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