Gene Cpin_6269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6269 
Symbol 
ID8362451 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7900945 
End bp7901613 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content46% 
IMG OID644968397 
Product4'-phosphopantetheinyl transferase 
Protein accessionYP_003125876 
Protein GI256425223 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2091] Phosphopantetheinyl transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00689179 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.760663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATTAA TACGTACCAT ACAAATAAAC CCCGGCTGCC GGTTGGGGGT GTGGAGAATA 
GAAGAGGAAG AGGCTTTTTT CCGGGAGAAG GTGAATATCT CTCCTGCGAT ACACCATCCG
CATAAGCGAT TGCAGCATTT TGCAGGGCGC TACCTGCTCC AGGAATTATT CCCGGGTTTT
CCGCTCTCCA GCATACAGAT CATGCAGAGC CGGAAGCCTT ACCTGGAAAG CAACAGTCTG
CATTTTTCCA TCTCCCATTG CGGGGATAAT ATCGCTGCCA TCGTCAGCAG TAACGGCGCT
GTAGGTATTG ATATTGAAGA TGTAAAACCT AAAATAGAAG CAGTCTCCCA CAAGTTTTTA
TCGCCGGAAG AGCGTGCTTT TATTGATCCC GTGAACGCCC TGCCCCATAA GACGATCTGC
TGGAGCGCGA AAGAGGCTGT TTATAAGTGG TATGGACTTG GAGGGGTTGA TTTTAGAGAA
AATATGCAAC TTGCACCCTT TATTTTTCAG CCTAGAGGCT TCCTTACGTG CAATTTTAAC
AAAGCGGATA AAAATGCACG GTTATATTTG CAATATCTCA TGGAAAATGA ACTGTGTCTG
ACCTGGACAA ACGACGTCGA AGATCTCACA GTTCCCACCA TAGCAGAGAA CGCAGCTTCA
GGACATTAA
 
Protein sequence
MPLIRTIQIN PGCRLGVWRI EEEEAFFREK VNISPAIHHP HKRLQHFAGR YLLQELFPGF 
PLSSIQIMQS RKPYLESNSL HFSISHCGDN IAAIVSSNGA VGIDIEDVKP KIEAVSHKFL
SPEERAFIDP VNALPHKTIC WSAKEAVYKW YGLGGVDFRE NMQLAPFIFQ PRGFLTCNFN
KADKNARLYL QYLMENELCL TWTNDVEDLT VPTIAENAAS GH