Gene Cpin_6221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6221 
Symbol 
ID8362403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7844929 
End bp7845384 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content39% 
IMG OID644968349 
Productheat shock protein Hsp20 
Protein accessionYP_003125828 
Protein GI256425175 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0071] Molecular chaperone (small heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTCG TAAAATTCAA CCAGGCTCCA GCAGTAAAAT CTTTCGGTGG TTTAGTAGAA 
GATATCTTCA ACCACAATGG CTTTAGCAGA TTTTTGAAAG ATGACGTTCA CACCAACGAC
TTCTACGGTG CTTACCCACC AGTGAACATC ACAGAAAATA AAGAAGGATA CCAGGTAGAT
CTGCTTGTAC CAGGTTTAGC AAAAGAAGAT TTCAAGATCA ATCTTGAAAA CAAAGTATTG
ACTATCAGTG CAGAGAAAGC TGCTGAAACC AAAGATGAAA ATCAGAAACA ATTACGCAGA
GAGTTCAGCT TCCGTTCATT CAAACGTTCC TTTACCTTAA ATGAACAGGT GGATGCTGAA
AAGATCCAGG CGAAATACGA AAATGGTATA CTGAAATTGC AGCTGGCGAA GAAAGAAAAA
GTGCAGGATG CAGCAAAAGC AATTGTAGTT GAATAA
 
Protein sequence
MTFVKFNQAP AVKSFGGLVE DIFNHNGFSR FLKDDVHTND FYGAYPPVNI TENKEGYQVD 
LLVPGLAKED FKINLENKVL TISAEKAAET KDENQKQLRR EFSFRSFKRS FTLNEQVDAE
KIQAKYENGI LKLQLAKKEK VQDAAKAIVV E