Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6209 |
Symbol | |
ID | 8362391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7833286 |
End bp | 7834014 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644968337 |
Product | triosephosphate isomerase |
Protein accession | YP_003125816 |
Protein GI | 256425163 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0149] Triosephosphate isomerase |
TIGRFAM ID | [TIGR00419] triosephosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.74008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGA CCATCGGACA GGCAGAACAG CTGATCAATG ACATTTTGCA GGCTGGCCTG CGTTTGAAGG AAGGACAGGA AGTGGTAGTC GCCACCCCTT TTCCATACCT GTTGAAAGCA AAGGCATTAT TGAAAAATAC GCCTGGTTTT TATGTGGCAG CTCAGAACTG TGCATCTGAG AAATCTGGTG CATATACTGG TGAGGTATCT GCAGAAATGC TGGCTTCTAT TGGTGTTGAC TATGTAATAC TGGGTCACTC TGAGAGAAGG GAATATTTCC AGGAAAGCAA TGCTGTACTG GCAAAGAAAA TTGATCTGGC GCTGGCAAAC GGCATCAAAC CAATCTTCTG TTGCGGTGAA CCACTGGAAG TAAGGAAAGC TGAAACACAG AACGAATATG TTGCAAAACA GCTGGAAGAG AGCCTGTATC ACCTGACTGA AGAGCAGCTG AAAGATGTCG TTATCGCTTA TGAGCCAATC TGGGCAATCG GTACTGGTCT GACAGCGAGC GCTGCGCAGG CCCAGGATAT GCACGCTTTC ATCAGAGGAC AGATCGCTGC TAAATATGGC AGAGAAGCGG CTTTACGCCT GACTATCCAG TATGGTGGTA GTGCAAAACC TTCTAATGCA GGTGAACTGT TTGCTTGTCC TGATGTGGAT GGTGGTCTGA TCGGCGGTGC TTCATTGGTA GCTGCTGATT TCCTGGCTAT CGTTAGTCAT CTGGGATAA
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Protein sequence | MNLTIGQAEQ LINDILQAGL RLKEGQEVVV ATPFPYLLKA KALLKNTPGF YVAAQNCASE KSGAYTGEVS AEMLASIGVD YVILGHSERR EYFQESNAVL AKKIDLALAN GIKPIFCCGE PLEVRKAETQ NEYVAKQLEE SLYHLTEEQL KDVVIAYEPI WAIGTGLTAS AAQAQDMHAF IRGQIAAKYG REAALRLTIQ YGGSAKPSNA GELFACPDVD GGLIGGASLV AADFLAIVSH LG
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