Gene Cpin_6209 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6209 
Symbol 
ID8362391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7833286 
End bp7834014 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content48% 
IMG OID644968337 
Producttriosephosphate isomerase 
Protein accessionYP_003125816 
Protein GI256425163 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0149] Triosephosphate isomerase 
TIGRFAM ID[TIGR00419] triosephosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.74008 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTGA CCATCGGACA GGCAGAACAG CTGATCAATG ACATTTTGCA GGCTGGCCTG 
CGTTTGAAGG AAGGACAGGA AGTGGTAGTC GCCACCCCTT TTCCATACCT GTTGAAAGCA
AAGGCATTAT TGAAAAATAC GCCTGGTTTT TATGTGGCAG CTCAGAACTG TGCATCTGAG
AAATCTGGTG CATATACTGG TGAGGTATCT GCAGAAATGC TGGCTTCTAT TGGTGTTGAC
TATGTAATAC TGGGTCACTC TGAGAGAAGG GAATATTTCC AGGAAAGCAA TGCTGTACTG
GCAAAGAAAA TTGATCTGGC GCTGGCAAAC GGCATCAAAC CAATCTTCTG TTGCGGTGAA
CCACTGGAAG TAAGGAAAGC TGAAACACAG AACGAATATG TTGCAAAACA GCTGGAAGAG
AGCCTGTATC ACCTGACTGA AGAGCAGCTG AAAGATGTCG TTATCGCTTA TGAGCCAATC
TGGGCAATCG GTACTGGTCT GACAGCGAGC GCTGCGCAGG CCCAGGATAT GCACGCTTTC
ATCAGAGGAC AGATCGCTGC TAAATATGGC AGAGAAGCGG CTTTACGCCT GACTATCCAG
TATGGTGGTA GTGCAAAACC TTCTAATGCA GGTGAACTGT TTGCTTGTCC TGATGTGGAT
GGTGGTCTGA TCGGCGGTGC TTCATTGGTA GCTGCTGATT TCCTGGCTAT CGTTAGTCAT
CTGGGATAA
 
Protein sequence
MNLTIGQAEQ LINDILQAGL RLKEGQEVVV ATPFPYLLKA KALLKNTPGF YVAAQNCASE 
KSGAYTGEVS AEMLASIGVD YVILGHSERR EYFQESNAVL AKKIDLALAN GIKPIFCCGE
PLEVRKAETQ NEYVAKQLEE SLYHLTEEQL KDVVIAYEPI WAIGTGLTAS AAQAQDMHAF
IRGQIAAKYG REAALRLTIQ YGGSAKPSNA GELFACPDVD GGLIGGASLV AADFLAIVSH
LG