Gene Cpin_6178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6178 
Symbol 
ID8362360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7797023 
End bp7797994 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content48% 
IMG OID644968308 
Productaldo/keto reductase 
Protein accessionYP_003125787 
Protein GI256425134 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0393691 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACAA TTGAAAAAAT AGCATTGGGT AATAATGGTC CGCTTGTGTC TAAACTGGGC 
TTGGGCTGTA TGCGTATGTC AGCAACCTGG GGACCGCGTA CTAATGATGA AGCAGAAAGT
ATCGCCACCA TCCAGGAGGC ATTGGACAGA GGAATCAATT TTTTGAATAC CGGTGACTTT
TATGGCAGCG GACACAATGA GCTGTTAGTA GGAAAGGCGA TCAAGGGCAG ACGGGATGAT
GCGTTTATCA GTGTGAAATT TGGCGCTATA TTCCATAACA GACAGCTGAT AGGGCTGGAT
ATACGTCCGA TAGCTATTAA GAACTTTATA AATTATTCAC TGGTGCGTTT AGGCGTAGAG
ACCATCGATC TTTACCAACC CTGCAGGCTC AATGATAGTG TGCCGGTGGA AGATGTTATC
GGTACTGTGG CTGACCTGAT CAAGGAAGGG AAAGTACGTC ACCTGGGTGT TTCTGAAATC
ACAGCAGATC AGCTGAAGAA AGCCAATGCG GTTTATCCGG TGAGCGCGCT GGAAATAGGG
TATTCACTGG CTGATCGTCA GATAGAAAGC GAGCTGCTTC CGACGGCGAA GGAACTGGGC
ATTGGCGTGG TGGCTTTCGC TAATACAGCG GAGGGCTTGC TGACCGGCGA AATGAAGGCG
CCACTTCCGG CGGATACTTA TCTGTCCCAT TTCACCCGTT TTCAGGGGGA TAACCTGATT
AAAAATCTGG AGAAGGTAGA GCTGTTGAAG CAGCTGGCGC GGGAGAAAGG TTGTACACCG
ACACAACTGG CTATTGCCTG GGTAAACAGA CAGGGTGAGC ATATTATGCC TTTAGTGAGT
ATGAGCCGCA GATCCAGACT GCCAGAAAAT ATGCAGGCGA TGGAGATTTC CTTTACAGCG
GCAGAGATCA ATCAGTTAAA TACAGATTTC GCCCCCGGAG CGATTCTCGG TAGTACTTAT
CTGCAACGTT AA
 
Protein sequence
MATIEKIALG NNGPLVSKLG LGCMRMSATW GPRTNDEAES IATIQEALDR GINFLNTGDF 
YGSGHNELLV GKAIKGRRDD AFISVKFGAI FHNRQLIGLD IRPIAIKNFI NYSLVRLGVE
TIDLYQPCRL NDSVPVEDVI GTVADLIKEG KVRHLGVSEI TADQLKKANA VYPVSALEIG
YSLADRQIES ELLPTAKELG IGVVAFANTA EGLLTGEMKA PLPADTYLSH FTRFQGDNLI
KNLEKVELLK QLAREKGCTP TQLAIAWVNR QGEHIMPLVS MSRRSRLPEN MQAMEISFTA
AEINQLNTDF APGAILGSTY LQR