| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6165 |
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| Symbol | |
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| ID | 8362347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7773982 |
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| End bp | 7778175 |
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| Gene Length | 4194 bp |
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| Protein Length | 1397 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968295 |
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| Product | histidine kinase |
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| Protein accession | YP_003125774 |
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| Protein GI | 256425121 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0000541195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTCCACG CTTTATCCCG GGCGTATTTC CGCTTTTCTG CTCATTGCCT GACACGTTAC
GCAGCGTTCT TTCGCTGTGC CTTACTGGGC GTCTTATTGT TGTCTGTTGC GCCGGTATTT
TCCCAGGCAC CGGTCCTTCA TTTTCGTCAC CTGACCAATG AACAGGGACT GTCAAATAGT
ACGATTGAGA CGATTTTCCA GGATAGCCGG GGCTTTATGT GGTTTGGTAC CAGGGACGGT
CTAAATAAAT ATGATGGTTA TCAGATCGTT GTGTATCGAT ATAATGCTGC AGACAGTACC
AGTATCAGTG ATAATTATAT CAGGTGTATC TATGAAGACA GAGAAGGCGT CATCTGGGTC
GGTACCCAGA ATGGTCTGAA CCGGTTTGAT GCCGGGAAGA ACAGTTTTAC CCGTTTTCGC
ACCCGGCCAG GGGGGCAGGG GGTGTTGAGC AATAACCAGG TGACCTGTAT TTATGAAGAC
GCGCAACGCC GTTTATGGAT TGGTACCTAT GGCGGAGGAC TGAATTTGTA TAAACGGGAG
TCGGGTACCT TTTCCAGTTT CAGACATAGC GGAGGTGAAT CAGGGCAGTT TTCTGACGAT
CGGGTGAATG CCTTCTGTGA AGATGCCAAA GGCCGTTTCT GGCTGGCAAC GGGGATGGGA
TTGGTAGAGT TTGACCGTAC AAGGTATCAA TTGATCGAAG CGTCTCCTTA TAATGGGAGA
AGGCAGGCTA TCCGGACCAT CCGGAATGAT CATCAGGACA ATCTATGGTT AGGCACGGAA
GAAGATGGTC TCCTCTGTTA TCATCCTGAT AGTGGTACCT ACCAGCTGTA TAGTCACCGG
GAACAGGAAC AAGGCAGTAT ATCCACTAAC CAGATCCGGG CGATCCTTCC CGACCGTCAG
GGGAACATCT GGATAGGAGG CGTTAACGGC GGATTGAACC TGCTGAACCC GGAAAGTAAT
TCCTTCTATC ATTATCAGAA TGAACCGGAA TATCCCCGGA GTTTGTCACA ACGTACCGTG
TCTGCGCTCT TTGAAGACAA ACAGGGAATT ATATGGATAG GCACGCACCG GGGGGGTATC
AATATATATG TGCCAGGTGC AGAGAAGTTC AGGCTCTACC AGCAGCAGGT GAAACAGAAT
AGTCTGAGTT ACAATGACGT GAAGGCTTTT TGTGAGGATG GGAAGGGGAG GATCTGGATA
GGAACTGATG GCGGCGGACT GAATCTGATG GATCGCAACA GCCAGACCTT CCGGCATTAT
CAATATGACG CTTTTAATAA GAACACGATC GGATCGAATG AGGTGCTGAG TATTACGGAA
GACCGGACGG GCAATCTCTG GGTAGGTACC TGGGGCGGAG GCCTGAACCT GTATCACCCC
GGCACGGAGA GCTTTACCCG ATTTGTTAAT AATCCGGCTG ACCCGCAGAG TATTCCTTCC
AATTATGTAC AGAAGGTACT GGAAGATAGC AGGGGCCAGT TGTGGATAGC TACTTATTAT
GGCGGGGTGA GTATCTATGA TCGTAATCGT CAGCAGTTCA CCCGTTTTAC CGGGACGGGG
AATACCCGTC TGTCTGGTAA TAATGCAGTG TCCATGACAG AAGATAAAAA AGGGCGGATC
TGGATCGGAA CAGATGATGG TGGATTGAAT TGTTATGATC CCGCGAGCGG AAAGATATCC
TGGTATTTTA TTGCAGGAGA GAAAAAGCCG GATCTGCGGG TGTTGTTTAC GGACTCCCAG
GGAAGGTTGT GGGCCGGACA ATCAGGATTG TACCTGTATA ATGAGACGGC AGATAGTTTC
GCCTTGTATA CAAATGAAGC CGGATTAGGG ACAGCCTTTA TCAAAGGTAT GACAGAAGAT
AAGGCGGGTA ATTTCTGGAT CTCTACTTCG AATGGTATCA CCTGTTATCA TCCGGATCAG
CATCAATATA AACAGTATAA TACGGGAGAT GGGTTACAGG GGTTGGAATT TGAAGCGAAT
GCCTATCTGC AGACAAAGGA CGGTCTGATG TTATTTGGCG GCATCAACGG TTTTAACGCA
TTCTACCCGG GGGAGATTCG CACGAATAAT TATCTGCCGC CAGTTTATCT GACCGATTTG
CAGGTCGCTA ATCAGCGCAT GTTACCTGGT ATGAAGGGTT CGCCATTGTT ACAGGATGTG
AGTGTGACGG ATAAGATCAG GTTTGACTAC CGGCAGTCTT CTTTTTCGTT CAGCTTCGCC
ACATTGGATT ATACCGCTCC CGGCAATAAC CAGTATGCAT ATAAACTTGA TGGTTGGGAT
AAGGACTGGA ATTATGTGGG GAATGAGCGC AAGGCCGCTT ATACAAATCT GAATCCTGGT
ACCTATGTGT TTCATGTAAA AGCTTCGAAT AGTGATGGCG TATGGAATGA AAAAGGTACG
TCTGTGGTGG TGGTGATTGA ACCGCCGTTC TGGAGAACCT GGTGGTTCAT CTTACTGCTT
TCTGCTGCCA TTCTGTATGC AGTATACCGG ATCCTGGCTT TCAGAAGAGC GTCTGAATTA
AAGAAGATCA GCGAGAAGAA AAAGGAAGAA GTACACCAGT TGAAACTGCA ATTCTTTACG
AATATATCCC ATGAGTTCCG TACACCGCTG ACATTGATAC TGGGTCCCTT GGAGAAGATG
ATCAGAGATG CAAAAGACAA TGGTCAGCTG CATTATTTCA AACTGATGCA GAAGAATGCG
TATCGTTTGC TGGACCTGGT GAATGAGGTG ATGGATTTCA GGAAAGTAGA GTCAGGTGTA
CTGCAGTTGA AAGTGATGCC GGCTAATCCG GCTTTATTCC TGGAAGAGAT CGCGGAGGAG
TTCAGGGAAT GGGCGGTTGA AAAGCAGATC CGGTTTACCG TAAATACGGT GCAACCACCA
GAAGAAGCCT GGTTTGATAA TCAGGTACTG GAGAAGATCA TTTACAATCT GCTGAGTAAT
GCATTTAAAT ATACGCCTGC GGGCGGAGTG ATTACCCTGG AAATGCGTAG TTCGCTGGAA
GAGATAAAGC CTTCCTTTCC GCATGAACTG GCGGTGCAAA ATGAGTATAA GACAGATGCT
TACCTGCATA TCAGGGTGGT GGATAATGGT ATCGGTATTT CGAAAGAATC GATCGAGCAT
TTGTTTGAAA GATATTTCAG GGTGAATGAA AATCACCTGG GTTCGGGTAT CGGACTGGCA
TTTGTGAAGA GTCTCACTTT CCTGCATAAG GGCAGTATAC ACGTATACAG TGAGCGGAAG
CAGGGGACGG AGTTTATCAT ATCGATCCCT TATCAGAAGG AAGATTATGC GGAGGGAGAG
CGATGGATGG GAGATCCGGC AAAGACAGCA CGGCAACTGG AAAGTCTGAT CTCCAATCAA
CGATATACGT TGACGCAGCC GGTGGAGAAT GGTGTAAGTG AAGTGGAGGA GGACACTGGT
CATTCGCAGG CATCATTGGC CACGATACTC GTGGTGGATG ATAACAGTGA GTTACGGGAG
TTTTTGAAGG GGGCATTGTT GCCGACGTAT CGTATTATAG AGGCGTCCGA CGGACAAATG
GGTTTTGAAA AAGCAAAGGC AGAGATGCCG GATATTATCA TCAGTGATGT GATGATGCCG
GTACTGGACG GTATTGCTTT TTGTAAGCTG GTAAAGGATA ACCTGGAGAC GAGTCATATT
CCGTTTATCA TGCTGACAGC TAAGACGGCA TTGTCTTCCA ATATTGAAGG AGCCGCTTCG
GGAGCTGATT TTTATTTTGG CAAACCTTTG AGTATTGAGT TGTTACTGAT CACGATCAGG
AATACGCTGG AACAACGCCG GAAGGCAAGG GAAAGATTCC TGAAGGATTA TTATTATGAA
GCGAAAGAAC TGGTGACATC CACAAAGGAT AAAGAGTTCA TGGATACACT GCTGGAAAAG
ATAGAGGAGC ATCTGATGGA TCCGGATTTT GATATCAGTG TGCTGTGCAG TAGTATGGGG
ATGAGTAAAA CGAACCTGTA TCAGAAGATC AAGCAGCTGA CGGGACAGTC CACCGGTGAT
TTCGTACGTA CCATTCGTTT AAAGAAAGCA GCGTATATCA TGTCGCATGA GGATGTACCA
CTGTCGGAGG TGATTTTACG GATAGGGATA CAGACGCAGT CTTATTTCAC GAAAGCGTTT
AAGAAGGAAT TCGGGAAGAC GCCGACGCAG TTTTTACAGG AACTGAAGCA GTAA
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| Protein sequence | MFHALSRAYF RFSAHCLTRY AAFFRCALLG VLLLSVAPVF SQAPVLHFRH LTNEQGLSNS
TIETIFQDSR GFMWFGTRDG LNKYDGYQIV VYRYNAADST SISDNYIRCI YEDREGVIWV
GTQNGLNRFD AGKNSFTRFR TRPGGQGVLS NNQVTCIYED AQRRLWIGTY GGGLNLYKRE
SGTFSSFRHS GGESGQFSDD RVNAFCEDAK GRFWLATGMG LVEFDRTRYQ LIEASPYNGR
RQAIRTIRND HQDNLWLGTE EDGLLCYHPD SGTYQLYSHR EQEQGSISTN QIRAILPDRQ
GNIWIGGVNG GLNLLNPESN SFYHYQNEPE YPRSLSQRTV SALFEDKQGI IWIGTHRGGI
NIYVPGAEKF RLYQQQVKQN SLSYNDVKAF CEDGKGRIWI GTDGGGLNLM DRNSQTFRHY
QYDAFNKNTI GSNEVLSITE DRTGNLWVGT WGGGLNLYHP GTESFTRFVN NPADPQSIPS
NYVQKVLEDS RGQLWIATYY GGVSIYDRNR QQFTRFTGTG NTRLSGNNAV SMTEDKKGRI
WIGTDDGGLN CYDPASGKIS WYFIAGEKKP DLRVLFTDSQ GRLWAGQSGL YLYNETADSF
ALYTNEAGLG TAFIKGMTED KAGNFWISTS NGITCYHPDQ HQYKQYNTGD GLQGLEFEAN
AYLQTKDGLM LFGGINGFNA FYPGEIRTNN YLPPVYLTDL QVANQRMLPG MKGSPLLQDV
SVTDKIRFDY RQSSFSFSFA TLDYTAPGNN QYAYKLDGWD KDWNYVGNER KAAYTNLNPG
TYVFHVKASN SDGVWNEKGT SVVVVIEPPF WRTWWFILLL SAAILYAVYR ILAFRRASEL
KKISEKKKEE VHQLKLQFFT NISHEFRTPL TLILGPLEKM IRDAKDNGQL HYFKLMQKNA
YRLLDLVNEV MDFRKVESGV LQLKVMPANP ALFLEEIAEE FREWAVEKQI RFTVNTVQPP
EEAWFDNQVL EKIIYNLLSN AFKYTPAGGV ITLEMRSSLE EIKPSFPHEL AVQNEYKTDA
YLHIRVVDNG IGISKESIEH LFERYFRVNE NHLGSGIGLA FVKSLTFLHK GSIHVYSERK
QGTEFIISIP YQKEDYAEGE RWMGDPAKTA RQLESLISNQ RYTLTQPVEN GVSEVEEDTG
HSQASLATIL VVDDNSELRE FLKGALLPTY RIIEASDGQM GFEKAKAEMP DIIISDVMMP
VLDGIAFCKL VKDNLETSHI PFIMLTAKTA LSSNIEGAAS GADFYFGKPL SIELLLITIR
NTLEQRRKAR ERFLKDYYYE AKELVTSTKD KEFMDTLLEK IEEHLMDPDF DISVLCSSMG
MSKTNLYQKI KQLTGQSTGD FVRTIRLKKA AYIMSHEDVP LSEVILRIGI QTQSYFTKAF
KKEFGKTPTQ FLQELKQ
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