| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6158 |
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| Symbol | |
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| ID | 8362340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7766868 |
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| End bp | 7767992 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968288 |
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| Product | glycosidase PH1107-related |
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| Protein accession | YP_003125767 |
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| Protein GI | 256425114 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2152] Predicted glycosylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.907204 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.17294 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAT CAGGTCTCTT ATTTACGATG CTCCTATCGG GCGCCCTTTA CAGCTATGGG
CAGCAGTCCA TCAATAAATA CCCGGACTGG GCGATAGGGC CCTTTGTCAG ACCCACAGGC
GTCAACCCGA TCATCTCACC CGATTCCACG ACCCATTTTT ACGATCCTAT GCAAAAAAAG
CTACTGGACT GGGAAAGCAA TGACACCTTC AATCCGGCCG CTGCCGTAAA GGATAACAAG
GTCTATGTCA TGTACAGGGC TGAAGACAAA TCCGGTGTAG GAATAGGCGC CCGTACCTCG
CGTATCGGAC TGGCGGAAAG TTCCAATGGC ATCACCATGA GACGTACCGG CAAACCGGTA
CTGTTCCCGG ATATGGACGA TCAGCAGGAA TTTGAATGGA CAGGCGGTTG TGAAGATCCA
CGGGTAGCAG TGACGGAAGA CGGCACGTAT CTGATGTTAT ATACACAATG GAACAAGAAA
GTGCCACGCC TTGGTGCGGC TACCTCCAAA GACCTGGTAC ACTGGAAAAA GCATGGTCCG
ATCTTCCAGG ATGCCTACAA TGGTAAGTTC CATGATATTG CTTCCAAATC AGCCTCCGTA
TTGACCACAC TCAAAAACGG TGAGCTGCGT ATTGCAAAAT ACAAAGGTAA ATACTGGATG
TACTGGGGAG AAAACCATGT ATATGCGGCT ACCTCCGAAA ACCTTGTCGA TTGGACACCA
TTGGTGGACG CAAATGGTGC ATTAAAGGAA CTGGCTTCTC CACGAAAAGG ATATTTTGAT
AGTCACCTGA CGGAATGCGG TCCTCCGGCT ATACTGACCA GCAAAGGCAT TGTACTCCTG
TATAATGGTA AGAACCGCTC AGGGGCAGAT GGAGATATTA ATTATACCGC CAATTCTTAT
TGCGCAGGAC AGATGTTGTT CAGTGCAGCA GATCCATCCA AACTGATCAG CAGACTGAAT
AAACCATTTA TGGTACCAGC AGAGTCGTTT GAGAAAAGCG GACAGTATCC GGCAGGGACG
GTGTTTATTG AAGGCTTAGT GTATTATAAG GGAAAGTATT TCCTGTATTA TGGTTGTGCG
GATTCAAGAG TAGCAGTAGC GGTGTATACG CCTTCGGCGA ATTAG
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| Protein sequence | MQKSGLLFTM LLSGALYSYG QQSINKYPDW AIGPFVRPTG VNPIISPDST THFYDPMQKK
LLDWESNDTF NPAAAVKDNK VYVMYRAEDK SGVGIGARTS RIGLAESSNG ITMRRTGKPV
LFPDMDDQQE FEWTGGCEDP RVAVTEDGTY LMLYTQWNKK VPRLGAATSK DLVHWKKHGP
IFQDAYNGKF HDIASKSASV LTTLKNGELR IAKYKGKYWM YWGENHVYAA TSENLVDWTP
LVDANGALKE LASPRKGYFD SHLTECGPPA ILTSKGIVLL YNGKNRSGAD GDINYTANSY
CAGQMLFSAA DPSKLISRLN KPFMVPAESF EKSGQYPAGT VFIEGLVYYK GKYFLYYGCA
DSRVAVAVYT PSAN
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