| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6155 |
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| Symbol | |
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| ID | 8362337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7761074 |
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| End bp | 7764763 |
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| Gene Length | 3690 bp |
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| Protein Length | 1229 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644968285 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003125764 |
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| Protein GI | 256425111 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.597613 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTGTG CCAGACGGCA GTCTTTCCGG TTATCACCAC AAACAGTGAA GACAGTGAAA
CTGAATGTTC TATTCATGTT TGCATTTCTG ATGCAAGTTA GTGCCAGCGG CTGGTCACAG
GTCATCAACT ATTCCGGGAA CAATGTCCCG CTTACGACAA TCTTCAGCAT TGTTAAACAG
CAAACCGGCT ACGTGGTACT CTACAATCCG GATCTGGTAA AGAAGACTAC ACCTGTAACG
GTGCGTGCCA GCAATATGCC GCTGACCGCC TTCCTGGACA AAGTCCTGGC AGAAAGGTCA
TTGGGCTATT CCCTGGAAGA TAAGACCATC TTTATTACAA AGCGTACCAC GCCTGCGCGT
CCGGCAGTCA ATGAAGCTGC TGTTGAGAAA GCGGCAGTCA TTCTGCCAGT AGTAAGTGGT
TTCATAAAAG ATGACAAAGG ACAGTTCCTG CCGGGTGTCT CTGTAAAAGT GAAAGGCTCA
CTTTTCGGTA CCAGCAGTAG TGAATCCGGT TATTTCAAGT TAACGGGTAT ACCTGCTGAT
GCTGTGCTGG CTATCTCCAG TGTAGGGTTC GAATCTCTTA ACATCCCATT GCAGATGTGC
TGTAACAGGG TCATGGTAAA GAATGTCGAC GCTACCATGG GTGATGATGG CAGTCTGGTA
CTGACTATTA CCATGAAACT CGCTGTGAAA TCACTCGAGG AGATCGCTGT TACGAATACC
GGTTATCAGG AATTGCCAAA AGAACGTTCT ACCGGTGCTT ATGGAACTGT TGACAATAAA
GCGCTCAATG CCCAGATCAA TACAGACCTG GGTGCCGCTG TTGAAGGTAA GGTAGCGGGC
CTGAGTCTTT ACAAAGGTGA GCCAATGGTC AGGGGATTGA GTACATTTTC AGGAAGTGTA
GGTACGTATC CGCTGATAGT ACTCGACGGA CTGCTTACTG AAAATACCCT GGATATGATC
AACCCTTATG ATGTCGAGTC TATTACCGTA CTCAAAGATG CTGCTGCAGC GTCCATTTAT
GGTGCGCGTG CCGCAAATGG CGTCATTGTG ATTAATACAA AGAAAGGTAA AAGAGGAGGG
GTCAGTCTCT CAGTAAATGC AGATTACTTT GTAACAGAGC GTCCTGACCT TAGTAAGATG
CATTACGCTA CTTCCGGGCA GATGGTTGAT TATGAAAGGG ATATCTATGC AGGTGAATTA
CGCCGGTATG CAAATGCGCA GGAATTATTT AACTACTATG GTAGCGTTGG CGGAAACACG
AGTAGATACT TTTCTCCATT GTACAATCTG TACAGAAAGG AAAGCATTGG CGAGATCAGT
ACACATGAAA GAGACGCTGC CATCGAGCAA TTGAAAAGCT ACGACTATTA TCAGCAGTTT
CATGATAATG TATGGCAGAA CCAGGTGCGG AAACGTTTTA ATATTTCACT TGGTACAGGC
AGTGACAAGA GCAATACGTA TTTTTCCATT AACTACGATG GTAACAACCA GCTCATACGC
AATAACACCG ACGAGAACCT GAACATTTAT CTGAAATCAA GCTTTAGTCC GCTTCCCTGG
CTGACGGCAA CATTCGGTGC AAACGGTGCT TATTCGAAAG TAATAGCATC GGAGAATCTC
TATACTGACT ATAAGACACA ACCTCGCTAT AGTCGCATCG TAGATGAAAA TGGGAATCGC
GTTTATGCTG ACTATGTATC ATTCAGAGAC GGTTTTAGTA GCTCTGATTA CGTAAATGGT
ACTGTCATTG ATCAACTAAA GGGCAATACA CAATTTAAAT CTTTCAGTTT CAATCTGCTC
GATGAACTGG ATAATAGCAG GAGTAAATCA CAGCAACTGC GTTTGCGTAC ATTTGCAGAT
ATAGGCGCTA AGTTGTTTGC GGGATTGAAA TACAGCCTGA AGTTCCAGTA CGAAACGTCG
CGGAATGAAC AGGAGAGTTT TGCAGGAAAG GATGATTACC GCATGAGGTA TCTCTACAAC
GCAATGACAA GCTATAATGC AACGACTAAC ATTTATACAC ACGAAATTCC CTTTAGCGGA
CGTCTTTACC AGATGAATCA GCAGGCGGAC AACTTTACCT TCCGCCAGCA GCTTGATTTC
GACAGGTCAT TTAATGTCAA TGGCAGAACG CATGATTTCA ATGCCATTGG CGGTTTTGAA
ATGAGACAGT CCCGCACACC GGTATCTGTA AGCGACCTGC GGTACGGATA TGATCCTGTT
ACATTGACTT CCCAACAGGT GGATTGGTAC CGCCTTGGTG AATCGGGGAT CAATAGTTAC
CTGTTTGGTA CAACTACACT TGGTTATCAA CCGGGAAAGA ATAAAACAGA GGTACGCCAC
AGATTTGCAT CTTACTATGG TAATATCGGT TATACCTTTG ACCGACGTTA TAACGTCACT
GCCAGTGCAA GGATAGATCA GACCGACCTG TTTGGTACAG ATCCGAAATA CAGGAACCGC
CCGCTGTGGT CAGTCGGTGC AGGATGGAAC GCAACAAATG AAGCATTCCT GAAAAATATC
AGCTGGCTTG ACTTCCTGAA AGTGCGCGTG ACTTATGGTG TGAATGGTAA CGTCGATCAG
ACCTCATCTC CATATATCAC CGCCAGACTG AGAAGTGATA ACCTGTTCAC TGAATTACAG
TATACAGACA TCCTTGCATT GCCTAACCCG AAGTTACGCT GGGAAAAAAC GGCGACGCTC
AACTTCGGTA CAGATTTTAC TATATGGAAT AACCTGCTGA GAGGTAGTAT TGATTACTAC
AGAAAATACA GCTCAGACCT GATTGCTACA AGCACGCTTG ACCCTACGGT AGGTACCAGC
TCCCTCAGCA TCAACAACGG TGCGATGTCT AATCGTGGTA TCGAACTCAA TCTTTCTTCA
GAATGGCTGA ATAAAAAAGA TTTCGGGGCC GTGTCGTCAT TCGTGATCGC CTTTAACAGG
AACAGGATAG AAAAGGTAAG CAATGCCGCG ACAACCGGAT ATTCATATAT ATCGTCTCCG
TCAAACTACT ATTATCCCAA TACACCGTTT AACTCCGTAT ACGCTTACAG ATATGGCGGA
ACTATCAATG GATACCCGTA TATACTGGAT GAGAACGGCC AGCCTAATGT GATTTTCGAT
GCAAATGGGA ATCCTACAGA CGTTAAACAG GTAAATGGTC CTGCTGCGAT AATCAGAGTA
GGTACACTGA TCCCTAAGTT CAACGGCTCA TTCCGTCAGA GTTTCCGCTA TAAAGGCGTA
GAACTGGGTG CTATGTTTGC TTTCTATGGT GGCCATCAGA TGAGAAGAGA TCGTATGGAC
TTTTCGGGTA CTACCCAGCA GAACCGCGAA CTGGCTAATC GCTATAAAGA TGAAGTTCCG
AATGGTAATC CGAGACTGGA ACTGGACTAC CCTGATGTCC TCAGAAGTTA TGCTACTACA
CTGTCTTCTT ACTGGCGTTA TTCAGATATT CAGGTGGTGA GCGCTACTTC TGTCAAGCTA
CGTAATCTTT ACTTATCCTA TACCTTGCCC CAATACCTGT GCAAAAACAT ATTCGCTAAA
CAGGTAAAGT TCACTGCACA GGCGAATAAC CTGTGGATGT GGAGTAAAGC CGGGGACGAT
CTTGACCCGG AAACAGCAAG CCTTAACAGT GGGACCAGAA ATCTGCCTAC ATCGCGTTCA
TTCCTGTTCG GTGCAGCGGT TAGTTTCTAA
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| Protein sequence | MSCARRQSFR LSPQTVKTVK LNVLFMFAFL MQVSASGWSQ VINYSGNNVP LTTIFSIVKQ
QTGYVVLYNP DLVKKTTPVT VRASNMPLTA FLDKVLAERS LGYSLEDKTI FITKRTTPAR
PAVNEAAVEK AAVILPVVSG FIKDDKGQFL PGVSVKVKGS LFGTSSSESG YFKLTGIPAD
AVLAISSVGF ESLNIPLQMC CNRVMVKNVD ATMGDDGSLV LTITMKLAVK SLEEIAVTNT
GYQELPKERS TGAYGTVDNK ALNAQINTDL GAAVEGKVAG LSLYKGEPMV RGLSTFSGSV
GTYPLIVLDG LLTENTLDMI NPYDVESITV LKDAAAASIY GARAANGVIV INTKKGKRGG
VSLSVNADYF VTERPDLSKM HYATSGQMVD YERDIYAGEL RRYANAQELF NYYGSVGGNT
SRYFSPLYNL YRKESIGEIS THERDAAIEQ LKSYDYYQQF HDNVWQNQVR KRFNISLGTG
SDKSNTYFSI NYDGNNQLIR NNTDENLNIY LKSSFSPLPW LTATFGANGA YSKVIASENL
YTDYKTQPRY SRIVDENGNR VYADYVSFRD GFSSSDYVNG TVIDQLKGNT QFKSFSFNLL
DELDNSRSKS QQLRLRTFAD IGAKLFAGLK YSLKFQYETS RNEQESFAGK DDYRMRYLYN
AMTSYNATTN IYTHEIPFSG RLYQMNQQAD NFTFRQQLDF DRSFNVNGRT HDFNAIGGFE
MRQSRTPVSV SDLRYGYDPV TLTSQQVDWY RLGESGINSY LFGTTTLGYQ PGKNKTEVRH
RFASYYGNIG YTFDRRYNVT ASARIDQTDL FGTDPKYRNR PLWSVGAGWN ATNEAFLKNI
SWLDFLKVRV TYGVNGNVDQ TSSPYITARL RSDNLFTELQ YTDILALPNP KLRWEKTATL
NFGTDFTIWN NLLRGSIDYY RKYSSDLIAT STLDPTVGTS SLSINNGAMS NRGIELNLSS
EWLNKKDFGA VSSFVIAFNR NRIEKVSNAA TTGYSYISSP SNYYYPNTPF NSVYAYRYGG
TINGYPYILD ENGQPNVIFD ANGNPTDVKQ VNGPAAIIRV GTLIPKFNGS FRQSFRYKGV
ELGAMFAFYG GHQMRRDRMD FSGTTQQNRE LANRYKDEVP NGNPRLELDY PDVLRSYATT
LSSYWRYSDI QVVSATSVKL RNLYLSYTLP QYLCKNIFAK QVKFTAQANN LWMWSKAGDD
LDPETASLNS GTRNLPTSRS FLFGAAVSF
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