| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6148 |
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| Symbol | |
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| ID | 8362330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7749641 |
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| End bp | 7753297 |
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| Gene Length | 3657 bp |
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| Protein Length | 1218 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968278 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003125757 |
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| Protein GI | 256425104 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAATC TGAAAAAGGT TGCGGCCTTC TGCTGTCTGC TCTTATGCAG CTTGCAGATA
TTTGCTGCCG TAACCCGCCA AAATCAACCG GGAATTTCGC TGAAAGAAGC GCTTAAAAAC
GCCTCTTCCA GGTTCCATGT ATCCTTTATC TATGAAGATG AACTGGTAGC TAATAAGACC
GCTAAGGTGC TGCCGGACGC CAGTTTTAAA AACGTGGAAG GATATCTTGA TGTTATTCTG
AAACCTTATC ACCTGCAATT CAGAAAACTA AGCAATACAC AATATGCCGT ATTTGCTAAA
CAACCTGATG CAGCTGCCAG AGACAAAGAA AGATCAAAAA CCAATCAGAT GGCTCCGGAA
GAAGCTGCCC CTTCACAGGC AGCTCCCGGC CAGCCTGTAC GGTCAATACA GATAGAGATC
GGTAACGGTG ACGGTGAACA GGATAATACG CGCTTCCTGT TTGGCGTCGT GACTGACGAC
AACGCAGCGC CTATCACCTC CGCTACCGTA AGAGTGCCTG GTACGAATGT CATGACACTG
ACGAATGCGC AGGGTGAATT CAAGCTAAAA GTGCCTTTGA ATACGCGTAG TCTGCAGATC
TCCTGTGTAG CCTATGAAAC ACAGGAATTA CAACTCTCCA GAACGACTTA TTACGACGTA
AAACTGAAAG ATAAAACCGG TTATCTGAAG CCTGTTGAAG TAGTCTCTAC CGGTTATGTG
AATCTGCCTA AAGAACGTGC CACCGGATCT TTCGGAGTCG TGACAGCAAA AGAACTGGAG
AAAGTACCTA CTGCCAACGT ATTACAACGT CTCGAAGGAC AGGTGCCCGG CTTACAGCTG
CAGGTCACTT CCGGTGATAA CAGTTTTGTG TATGATAACG TGACACCCGC CATTAATAGT
AATACAAGAA CGATCGGCCG TAATGACTAT GGTGTGAATA TCCGTGGTAC AACCACCATC
AGAAGTGAAA GTATGCCATT GGTCGTAATT GATGGTTTCC CTACTGAAAT GGACCTGAAG
ACCTTCAATC CGAATGATAT TGAACAGATC ACTTTCCTGC GTGATGCAGC AGCAGCCTCT
ATCTGGGGCG CCCGTGCAGC TAATGGTGTG ATCGTAGTAA CAACAAAGAA AGGCAGAATG
CGTCAGCCGG CTGTGAACTT CTCCGCAGGT TTCGGCACAC AGGCCAGGCC AGCTGTAAGT
TATCTGCCAT TGATGAATTC CAGTCAGGTA CTTGCTTATG AGAAAGAACT GGTAGACAAA
GGCGTGATCA ATGCTTCCAC CTATAATCCC TATACCTCCG GTGTTAAATA TTTTGTCAAC
GAAGGTACTG ACCTGGCTTA TCAGCTGCGT AGTGGCAGGA TCACCCAGGC AGAATATGAT
GCCGCTGTTA CCCGCCTGGG ATCCATCAAT AACTATGGTC AGATAGAAGA CTACCTGTTA
CAGCGTGCCA CCAGTCAGAA CTATAACCTG TCTATCAGCG GTGGCTCCGA TGTGCATACC
TATTTCGTAT CCGGCTCTTA TGCAAAAGAG AGTCCGAGTA CTGTCGGCAG CGTAGGCGAA
AGGATCACAC TCACAGCCAA CCAGGAACTG AAGATCATTA AAAAGATCAC CCTGGCTTTA
AGCCTCAAAG GATCTTTCTT TAACTACAAG CAGAATGGTA AAGGCGCCGG CGCATTGCTG
AACGGTGCGA ATACATTCCT GCCTTACAAC TCCATCGCAG ATGGCAATGG TAATCCTACA
AGGTATTACT ATGGTATAGG CGAACACTAT GCTGATTCAT TGACCGCAAT GGGGTATAAA
GATTGGTCAT ACAACTATAT CGACGAACTC AAACTGGTCA ATAACAGTGC ATCCGATAAC
AACTATTCCG GTAACCTGAG TCTTAATATT CCGATCTACA AAGGACTGAC ATTTAACGGT
TCCTATGCCG TGGAACGTGT GAACTTCAAA AACGAAGTAT TGAATGATGT GAAATCATTT
TACACACGTA ATATTTTCAA CCAGGGTACA GTGATGCAGA ATGGTCAGCT CAGAAAGAAC
GTACCGGAAG GCGCGATCTT TTCAAACAAC TATACCACAC AGGATAACCA TAGTCTCAGA
GGTCAGTTCT CCTTTAACAG AGGTTTTGGT AGCATCCACG AACTGAATGC GCTGGCTGGT
GCGGAAATAC GCGAAACAAA TGCGGGTTCC TCCACGTTCA CGCTGTACGG TTATAATCCT
GAAACTGGTA TCTCGCAGAA TGTGGATTAC CTGACCCCTT ATTCAACGAT CTTCTATAGT
TCTGTATTTG CGGGTGCTCC TTCTCAGACA GACCGCAGGA ACCGTTTTCT TTCCTACTTC
GGTAATGCGG CCTACACCCT CATGAGCAGG TATACCTTTT CTGCCAGTGT GCGTTACGAC
GACTATAACA ACTTTGGTCT CGACAGGAAA TTCAGGGCAA AGCCTTTCTG GTCTGCCGGT
GCAAGCTGGA ATATCACACG GGAAGATTTC ATGAGACAGC TGAGCTGGAT CAGCAATCTG
ACCTTACGTG CTACTTACGG TGTGAATGGT AACATCAACC GTGAACTGCG TCCCTTTACA
AATATCGGTA TAGGTACTTC TGATTTTCAG ACAGGGCTGC CATATGCGAC CATCACTGCT
TACGCCAATC CTGCCCTCCG TTGGGAAAGC ACTTACGTGA CCAACTTAGG TATCGACTAC
TCCCTGTTCA ATGGACGACT GAGTGGTATG TTTGAAGTCT ATAACAAAAA GGGAAAAGAT
ATCATTTATC CGCTGGAAAT AAATCCGACT TATGTGGGGG CTAATAATAC ACTCAGCAGA
AATGGCGTGA CGATGTCCAA CCGTGGTATA GATATCGCTG TCAATGGTGC CGTAATAGAC
AGCAAAAGCT TCGGATGGAG CGTTGGTCTG ACATTTTCTT ACAACAGTAA TAAAGTAACA
GATAACCGCT TCGGACCAAC TACCTCCCTG TATTCCAGTT TATCTAATAC CGTCCTGAAT
GGTTATCCTT CTGATGGTGT ATGGGTATAT AAGAATGCGG GTCTGAGCAG CACCGGTCTC
ACACAGATCT ACAATGAAAA AGGAGAGAAG TTACTGCCGT CTCAGAACGT GACCAGTGTG
GATGCGTTGA AATATACCGG TCGTCGTTCT GCACCGTACT ACGGTTCTGT GAATAACACC
TTCCGTTATA AAAACTGGTC AATGTATGCG CTGATCACTT ATAGCTTCGG CAATGTATTC
CTGAAACCAG CAGTATCTAA TTATCCAAGT ACAAGAACAT TCAGTTACAG CCTGAGTGCT
GATATTGCTG ATCGCTGGCA GCAACCAGGT GATGAAGAAA AGACAGTAGT ACCTGTTGTG
GGTAATGCTT ATTCTCCACT GGCAGCTTTC CGTTATGCTT TCTCAGATGT AAATGTGCAG
CCGGGTGATT ACATCCGTTT CCGTGAATTA TCACTGGGAT ACCAGTTGCC GGAAGCCTTT
GCGGGAAAAG TATTTGCAAA GAATATCAAG GTAAGTGGCG TTGTACGCAA CCTGGGACTG
ATATGGAAAA AGAACGACGT AGGACTGGAT CCGGATTTCG TTCCGGCATT GAGCAGCACG
GTGATGCACC TGCCGCCAAC GACGAATTAC AGTCTGATGA TCAACATTGG TTTATAA
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| Protein sequence | MINLKKVAAF CCLLLCSLQI FAAVTRQNQP GISLKEALKN ASSRFHVSFI YEDELVANKT
AKVLPDASFK NVEGYLDVIL KPYHLQFRKL SNTQYAVFAK QPDAAARDKE RSKTNQMAPE
EAAPSQAAPG QPVRSIQIEI GNGDGEQDNT RFLFGVVTDD NAAPITSATV RVPGTNVMTL
TNAQGEFKLK VPLNTRSLQI SCVAYETQEL QLSRTTYYDV KLKDKTGYLK PVEVVSTGYV
NLPKERATGS FGVVTAKELE KVPTANVLQR LEGQVPGLQL QVTSGDNSFV YDNVTPAINS
NTRTIGRNDY GVNIRGTTTI RSESMPLVVI DGFPTEMDLK TFNPNDIEQI TFLRDAAAAS
IWGARAANGV IVVTTKKGRM RQPAVNFSAG FGTQARPAVS YLPLMNSSQV LAYEKELVDK
GVINASTYNP YTSGVKYFVN EGTDLAYQLR SGRITQAEYD AAVTRLGSIN NYGQIEDYLL
QRATSQNYNL SISGGSDVHT YFVSGSYAKE SPSTVGSVGE RITLTANQEL KIIKKITLAL
SLKGSFFNYK QNGKGAGALL NGANTFLPYN SIADGNGNPT RYYYGIGEHY ADSLTAMGYK
DWSYNYIDEL KLVNNSASDN NYSGNLSLNI PIYKGLTFNG SYAVERVNFK NEVLNDVKSF
YTRNIFNQGT VMQNGQLRKN VPEGAIFSNN YTTQDNHSLR GQFSFNRGFG SIHELNALAG
AEIRETNAGS STFTLYGYNP ETGISQNVDY LTPYSTIFYS SVFAGAPSQT DRRNRFLSYF
GNAAYTLMSR YTFSASVRYD DYNNFGLDRK FRAKPFWSAG ASWNITREDF MRQLSWISNL
TLRATYGVNG NINRELRPFT NIGIGTSDFQ TGLPYATITA YANPALRWES TYVTNLGIDY
SLFNGRLSGM FEVYNKKGKD IIYPLEINPT YVGANNTLSR NGVTMSNRGI DIAVNGAVID
SKSFGWSVGL TFSYNSNKVT DNRFGPTTSL YSSLSNTVLN GYPSDGVWVY KNAGLSSTGL
TQIYNEKGEK LLPSQNVTSV DALKYTGRRS APYYGSVNNT FRYKNWSMYA LITYSFGNVF
LKPAVSNYPS TRTFSYSLSA DIADRWQQPG DEEKTVVPVV GNAYSPLAAF RYAFSDVNVQ
PGDYIRFREL SLGYQLPEAF AGKVFAKNIK VSGVVRNLGL IWKKNDVGLD PDFVPALSST
VMHLPPTTNY SLMINIGL
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