| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6144 |
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| Symbol | |
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| ID | 8362326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7743459 |
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| End bp | 7745045 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968274 |
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| Product | leucine-rich repeat protein |
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| Protein accession | YP_003125753 |
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| Protein GI | 256425100 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4886] Leucine-rich repeat (LRR) protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.268952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCATC CCAAATCCTA CACAACCATT GACGATGCAC GTATCATGAC GCTGCAGGAA
GCCCTGGAAC AATACAAAAC GCCTGGTGTG TCGACATTTA TGCTCGAAGG CTTAACGGGT
AACTTCTATG TCTTTGACAA TGATGCGCAT TTCGAAAGTC TCGATCTTGA CAAAATGTTC
TATACCCAAG ATCGCTGCGG GGTACTTTTC CGCGGAAATC TTACAATTGA CGGTTTACTC
ACGCAACCGG AAACGGATTA TGGTCCTTTC ACACTGGTAC TGGGTAACGT CTCTGCGAAG
AACATCTTCA TGGGCGGCGG CTATATGCGT ATTGAGGGCA ATGTGACCGT TGAACAAACC
TTATATGCCG GCTGCTATAA CCATGGCATG TCTGACATTA ATGGAGATAT CTCCGCAGAA
GTGATTCTCT CTTCCGATCA TAGTTTCAAC TTCCACTCAG ACAAGGTGAA AAGAGGCGTC
TGGTTGTCGG ATATTGAACT GAAGGACGCA CCGGCACATG AGCCTGCGGA TGTGCTGAAT
AAAGGCTATT GGAGCAAAGC TGAGGAAAGT GTACAGACAG GCAATATATT GAAGGCAATG
GCAAAAGGGA CTTCTATCCT GAAGCCTGAT TCCGCTGCTT CACCGGTTTT GAAAAGACTG
GAAAAAGCCC TGTTGTCAAA GAACAAACGG GCCGACCTGT CGAAGATGAA ACTCAAAAGT
CTGCCAAAAG AGTTGTTCGC ACTTAAGGAG ATACAGCAGC TGAATCTGTC TAATAATCCG
CTGGAAAGTC TTGATGACGA ACTGGCTACT ATGGACCAGG TGACTACCAT TGATCTGGCA
GACTGCTACC TGCAGGAAGT GCCGGAAGTA TTGTCCAGGA TGCCCGGACT TGAATCACTG
AATCTTTCTT ATAATAATAT CAGTACGGTT CCGGATGCTT TTGCTGCTTT ACAGGGTCTT
AAAAAACTGT CGTTGTTCAA TTGTCAGTTA ACAGCGATTC CAGCCGTTTT AAAAGATCTT
CCTGCCCTGG AAGTACTGAA CGTCGATTAT CAGAAAGAAG ACGCCTTATT GACCCTGGAT
AGTGGCTTCC AGTCACTGAA GGAATTACAC CTGAGAGGCA AGTTATTGAC AGTACTTCCT
AAACTGGAAC ACCTGGTTAT AGCAGGTTTT GGTACAAGGG AATTACCGGA AGCTGTGATG
GGGTGTAAAA AACTGAAGAA ACTGGATATC GCTAATGCGG GCAGTCTGGC AGGCTTACAG
GATAATTTCT CCGTATTTCA GCAGCTGGAA GAGATCTCAT TCAATCTACA TGATGGTTTT
CTGAATGTAA AGGTACTGGC TACATTACCC AGGCTGAAAA CGGTGAATGT ACGGTACTCC
GGCCATACGT CGCGTAAGCG TTTCCTTGAA TTACTGGAGG TACCGCAATG GTCAGTATTG
TGTGTGCAGG GTTCCCTTGA TGATTCAACG TTGCAGAAGG AGATACTGAA CCGTCCGAAT
CTGAAGAAAC TGGAAACACG TTCCAGTTTC GGTACAGAGG TCGTTGATAT TGCGGAAGCC
AGGAAATGGC TGAAAATAAC GATATAA
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| Protein sequence | MDHPKSYTTI DDARIMTLQE ALEQYKTPGV STFMLEGLTG NFYVFDNDAH FESLDLDKMF
YTQDRCGVLF RGNLTIDGLL TQPETDYGPF TLVLGNVSAK NIFMGGGYMR IEGNVTVEQT
LYAGCYNHGM SDINGDISAE VILSSDHSFN FHSDKVKRGV WLSDIELKDA PAHEPADVLN
KGYWSKAEES VQTGNILKAM AKGTSILKPD SAASPVLKRL EKALLSKNKR ADLSKMKLKS
LPKELFALKE IQQLNLSNNP LESLDDELAT MDQVTTIDLA DCYLQEVPEV LSRMPGLESL
NLSYNNISTV PDAFAALQGL KKLSLFNCQL TAIPAVLKDL PALEVLNVDY QKEDALLTLD
SGFQSLKELH LRGKLLTVLP KLEHLVIAGF GTRELPEAVM GCKKLKKLDI ANAGSLAGLQ
DNFSVFQQLE EISFNLHDGF LNVKVLATLP RLKTVNVRYS GHTSRKRFLE LLEVPQWSVL
CVQGSLDDST LQKEILNRPN LKKLETRSSF GTEVVDIAEA RKWLKITI
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