| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6138 |
|---|
| Symbol | |
|---|
| ID | 8362320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 7738916 |
|---|
| End bp | 7739494 |
|---|
| Gene Length | 579 bp |
|---|
| Protein Length | 192 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 644968269 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003125748 |
|---|
| Protein GI | 256425095 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4430] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCTG AAGTGGATGC ATATTTAAGC GAACTTACAC AATGGCGGGA TGAGTCTGAA
AAGTTGAGAA AGATCATTCT TGCCACTGAG TTGACTGAAG AACTGAAATG GGGGAAGCCC
TGTTACAAGT ACGGCAATAC CAACCTTGTG ATCATCCAGG GTTTTAAGGA TTACTGTGCA
TTGCTGTTCT TCAAAGGCGT TTTATTGAGC GATCCGGAAA GCGTACTCGT TAAGACCGGA
GAAAATACAG AGGTCGGCAG GCAACTAAGG TTCACCAGCG TAAAGGAGAT CACAAAATTA
GCGCCGGTAA TCAGCGCTTA TATCTATGAA GCAATAGAAG TAGAAAGAGC CGGTCTGAAA
GTGGAAGTAA AGAAAAGTAC CGAACTGGAT ATCCCGGAAG AGTTTCAACA GCAATTAGCA
GCAAATGCTG ACTTGAAGAA AGCCTTCTTT GCATTGACCC AGGGACGGCA GAAAGCATAT
ATCTTTTATT TCTCCGGTGC CAAACAATCC AAAACGAGAA TGAGCAGGGT GGAAAGATGT
ATACCGCAGA TCCTGGAAGG AAAGGGGATG AATGATTGA
|
|---|
| Protein sequence | MNPEVDAYLS ELTQWRDESE KLRKIILATE LTEELKWGKP CYKYGNTNLV IIQGFKDYCA
LLFFKGVLLS DPESVLVKTG ENTEVGRQLR FTSVKEITKL APVISAYIYE AIEVERAGLK
VEVKKSTELD IPEEFQQQLA ANADLKKAFF ALTQGRQKAY IFYFSGAKQS KTRMSRVERC
IPQILEGKGM ND
|
|---|
| |