| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6134 |
|---|
| Symbol | |
|---|
| ID | 8362316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7736021 |
|---|
| End bp | 7736938 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 644968265 |
|---|
| Product | transcriptional regulator, AraC family |
|---|
| Protein accession | YP_003125744 |
|---|
| Protein GI | 256425091 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAAAAGA AGGCGATTCC TCATATTCAT ATCGGCACAT TGAACACGTA TAATGAATTA
CTGGGTTTCC CCAAACCGAG AAACCCTTTA TTCAGTATAC AGCGTTTTGA AGACTTTCCG
CTGTTAGCGG CGGATGGTCC TATCAAATTA ACCATGGACT TTTACCAGAT CACTTTTAAA
AAGAATTGTG GTAACAAGAT CATATATGGT CAGTCCCTAT ACGATTTTGA TGAAGGGGTA
TTGTCCTTCT TCTCTCCCAA GCAGGTAGTT ATTAAAGAAC CGGATCAGAT AGCTCCTACC
GGGTTTATTG TCCTGATACA TCCGGAATAC CTGCGAGGGC ATGCACTGGA AAGTAAGATC
AAAAACTATG GTTTCTTTGA TTATGCCGTG AATGAAGCAC TGATATTATC AGCTGAAGAG
GAAGACTTTA TTCAGCACAT TTTCATACAG CTGGAGAAAG AGTTTAACAG GGCGATAGAT
CACCTGAGTC AGGATGTTAT TTTATCGAAC CTGGATCTGT TACTCACGTA CAGCAACCGT
TTCTATACCC GGCAGTTTAT TACCCGGAAA CAGCATTATA ACAGTCTGCT GGTAAAATTC
GAAGCGTTGT TGGATGAATT ATTTGCTGAA AGCACCCTGG CAGAAAAGGG GCTACCCAAT
GTGACGGATA TCGCCGCTGC TTTCCATCTA TCCTCGCGCT ATTTCAGTGA TCTGATCAAG
GAACACACCG GACGAACCAC GCAGCAGCAT ATTCACGATA AACTGATTGA TAAAGCAAAA
GAAATGTTGT CAGCCACTAA CCTGTCTGTC AGTGAAATTG CCTATCAACT GGGTTTCCAG
CATTCCCAGT CATTCAGTAA ACTGTTCAAA GCCAAGACTG ATCAGTCTCC GTTGACATTC
AGAGCAGGGT TTAATTAG
|
|---|
| Protein sequence | MKKKAIPHIH IGTLNTYNEL LGFPKPRNPL FSIQRFEDFP LLAADGPIKL TMDFYQITFK
KNCGNKIIYG QSLYDFDEGV LSFFSPKQVV IKEPDQIAPT GFIVLIHPEY LRGHALESKI
KNYGFFDYAV NEALILSAEE EDFIQHIFIQ LEKEFNRAID HLSQDVILSN LDLLLTYSNR
FYTRQFITRK QHYNSLLVKF EALLDELFAE STLAEKGLPN VTDIAAAFHL SSRYFSDLIK
EHTGRTTQQH IHDKLIDKAK EMLSATNLSV SEIAYQLGFQ HSQSFSKLFK AKTDQSPLTF
RAGFN
|
|---|
| |