| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6121 |
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| Symbol | |
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| ID | 8362303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7718626 |
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| End bp | 7719987 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644968252 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003125731 |
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| Protein GI | 256425078 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTATCA AACATACAAA CACAGGATAC AGCTGTTTGT TATTAAGCTG TCTGTCTGCT
GCCATCTTAC TGATGCATAT CACAATCGCA AACGGGCAAA CAGCAAATAA CAATACTTAT
AAAATCAGCC TTAACGAAGC AGTCGAATTT GCAAAGATCC AGAACAAGCT TGTTCAGGCA
GCGAATTTTG AAGAAACTGC CATGAGTGAA GACAAAAAGG ACGTATACAA AGCAGTATTG
CCGGATATCC GTGTAAATGG CTCCTATCAA AGATTCAGCG GTCTCACATT GTTCAACGAT
GGTCTTCGTC ATGCCAATAC GGAAGCACGA AGGCCCACAT CAACTTCAGC AGCCTTGGGT
ATTGAGGCAT TATTCAACAT CTATAGTGGT GGCAAGCAGA AAGCCCTGCA GCGTGAATAT
ACCTTCCGTG AAAAGCTGGA ACAGTTAAAT ACAAAAGATC AGTCGGGGAT TATCGCGTAT
CAGACTGCCG CCCAATACCT CGAACTAGTC AGACTGAATG AACAGGAAAA GTTCATCCAC
GAACAGGTAA AACGGGCAGC TGTAAGAGTA AAAGATATTC ATGCACTTTA CGACAACCAG
AAAGTAACCA GGAGTGATGT GCTACGTGCG GAGGTAAACC TATCAAACGT ACGGCTTTCC
CTGGAACAGA ATGAAAATGA CATTGCAATC GCCAATCAGA AGCTGGTGGT ACTGATGAAT
GTACCGGACG CCATACACAT CATACCACTC GATTCTGCGG GTATGTTAAA GCCCGACATT
CATTCGCTGT TACCGATCGC TGATGCTGCG GAAACATCCT CCTATAGTGT ACTAAAAGCC
GCTAAAAACG TCGAAATACA AAAGGAAAAG GTAAAAGGTG TTCGGAGTAA TAATAAACCA
AATCTGAGCT TCTATTCCGG CTATGGTATC AATTACCCAA ACTATTTATT CTTCCCTCCT
GTTGACCAAG CGTATGCGAT TGGCTTCGCA GGATTGAAAG CACAGTATAG TATTTCATCG
GTCTATCATA ATAAAAGCAG GATAGCAGCC GCTAAACTCC GGGTTAAAGA ACTCGAACTG
CGACAACAGG CATCTGCAGA TAATATACGG TCAGAAGCCA AAGCGTATTA TGCAAAATAT
GCAGAAGCAT TATCACGGAT CACGGTTAAT GAGCATTCTG TCCAACAAAC GGAAGTCAAT
TACCGGATCG TCAACAATAA GTATTTAAAC CAGTTAGCCT TACTGACTGA TCTGCTGGAT
GCAGACAATC TGTACCAGGA ATCACAATTC AACCTGGTGA AAGCACAAAC TGAAGCACTC
GTCATTTACT ATCGCCTGCT TTATACCAGT GGCAATTTAT AA
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| Protein sequence | MRIKHTNTGY SCLLLSCLSA AILLMHITIA NGQTANNNTY KISLNEAVEF AKIQNKLVQA
ANFEETAMSE DKKDVYKAVL PDIRVNGSYQ RFSGLTLFND GLRHANTEAR RPTSTSAALG
IEALFNIYSG GKQKALQREY TFREKLEQLN TKDQSGIIAY QTAAQYLELV RLNEQEKFIH
EQVKRAAVRV KDIHALYDNQ KVTRSDVLRA EVNLSNVRLS LEQNENDIAI ANQKLVVLMN
VPDAIHIIPL DSAGMLKPDI HSLLPIADAA ETSSYSVLKA AKNVEIQKEK VKGVRSNNKP
NLSFYSGYGI NYPNYLFFPP VDQAYAIGFA GLKAQYSISS VYHNKSRIAA AKLRVKELEL
RQQASADNIR SEAKAYYAKY AEALSRITVN EHSVQQTEVN YRIVNNKYLN QLALLTDLLD
ADNLYQESQF NLVKAQTEAL VIYYRLLYTS GNL
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