| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_6106 |
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| Symbol | |
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| ID | 8362288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7706567 |
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| End bp | 7707703 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968237 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003125716 |
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| Protein GI | 256425063 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAACA ATAGAATGCC GGCGCTACTG GCCTCTTTCG TGACATGGAT CGTCCTGAAT
GCCTGTCAGT CCGGTAAAGC AAATGAAGGG GCAGCTCAAT CAATGCCCGT TCCTGAATTG
CCGGTGTTGA CACTCGATAC CACTACAGCA CTTACCTCGC GCGAATACGC TGCTAACCTG
GAAGGAAAGG AAAACGTGGA CGTACGCACA CAGGTGGAGG GATATCTGGA AAAAGTATTC
GTAGAAGAAG GCAGTTTCGT GACGGCAGGT CAGCCACTGT TTAAGATCAA TGACAGGCCC
TATCAGGCGC AGCTGGAAAG AGATCAGGCT TCGCTGCGCG CAATGCAGTC GGCAGAATCA
AATGCGGCGC TGGAAGTAGA TAAAATGAAA CCGCTGGCAG ATAATAAAGT GGTATCCGAT
ATACAGCTGA AGACAGCCCA GACAAACCTG CAGACCGCCA GTGCCAATGT TGCACAGGCC
AAAGCTGCTG TCGCAGCTGC ACAGGTGAAT GTGGGTTTTA CGCTCATTAA AGCGCCTGTA
AGCGGTTATA TAGGCAGGAT CCCTAAACGG GTAGGAAACC TGGTAAATAG TTCAGATGCA
GCTCCGCTGA CCACCCTTTC AGATATCAGC AGGATCTATG CTTATTTCTC TATGAGTGAA
AATGACTTTA TCCGTTTTAG TAAAGGCGCT GCCGGTTCTA CTTTGCAACA ACAGCTGCAA
CGTATGCGTC CGGTGACACT TGTATTGTCT AATGGGGATG ATTTCTCAGA GAAAGGTCGT
ATTGAAATGG TAGACGGACA GTTTAACAGA ACGACCGCCG CTATCAGTCT CCGTGCTACC
TTCCCTAATC CTGCCAGCGT ACTGAGGTCC GGTAATACCG GTAAGGTGCG CATAGAGCAA
CTTAATGCCG GTGTTGTACT GGTACCACAA TCCGCTACCA TGGAAATGCA GGATAAACTG
TTCGTATACC AGCTTACCGA CAGCAATACA GTGAAAAGAC AACCCATTGT TACCGCCGGT
AGCAGCAAGG ATCATTTCAT CGTAGTAGAC GGTGTGAAAA CAGGAGACAG GATCATAACT
GCAGGCATGG AAACCATCAC CGAAGGTGCT GTGATCAAAC CTGCCGCAAA GAAATAA
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| Protein sequence | MSNNRMPALL ASFVTWIVLN ACQSGKANEG AAQSMPVPEL PVLTLDTTTA LTSREYAANL
EGKENVDVRT QVEGYLEKVF VEEGSFVTAG QPLFKINDRP YQAQLERDQA SLRAMQSAES
NAALEVDKMK PLADNKVVSD IQLKTAQTNL QTASANVAQA KAAVAAAQVN VGFTLIKAPV
SGYIGRIPKR VGNLVNSSDA APLTTLSDIS RIYAYFSMSE NDFIRFSKGA AGSTLQQQLQ
RMRPVTLVLS NGDDFSEKGR IEMVDGQFNR TTAAISLRAT FPNPASVLRS GNTGKVRIEQ
LNAGVVLVPQ SATMEMQDKL FVYQLTDSNT VKRQPIVTAG SSKDHFIVVD GVKTGDRIIT
AGMETITEGA VIKPAAKK
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