Gene Cpin_6049 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6049 
Symbol 
ID8362231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7647086 
End bp7647601 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content45% 
IMG OID644968183 
Productmethionine-R-sulfoxide reductase 
Protein accessionYP_003125662 
Protein GI256425009 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase 
TIGRFAM ID[TIGR00357] methionine-R-sulfoxide reductase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0487159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.218402 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAG GATTTATCAT TGTATTCGTT TCCCTGCTGC TATCAGCCTG TCAGGGGAAT 
GCACAAAAGA AGAAAGATAT GAACAAGGAA AACAACCCAT ACTACTCACG TACTGACACG
AGCCATCTGA ATGTAAGCAA TGCAGAATGG AAGAAGATTC TGCCTTCGGA TCTCTATAAC
GTATCCAGGG AGCAGGGTAC TGAGCGCGCC TTTACCGGTG AATACTGGGA TAGTGAAGCG
AAAGGTACTT ACTACTGTGC GGTGTGCGGT AATAAACTGT TCAGATCTGA TGCGAAATTT
GCAAGCAGTT GTGGCTGGCC GAGTTTCTTT GAACCAGTGC GGGAGAACAG CGTGATCTAT
AAGGATGATA ACTCGTATGG TATGCATCGT ATCGAAGTAG AGTGTGCCAG ATGTAACTCT
CACCTGGGGC ATATCTTTGA TGACGGTCCC GCACCCACGT ATAAAAGGTT TTGTATGAAC
TCCGTATCAT TGGACTTTGA TCCGGATGTG AAGTAA
 
Protein sequence
MKAGFIIVFV SLLLSACQGN AQKKKDMNKE NNPYYSRTDT SHLNVSNAEW KKILPSDLYN 
VSREQGTERA FTGEYWDSEA KGTYYCAVCG NKLFRSDAKF ASSCGWPSFF EPVRENSVIY
KDDNSYGMHR IEVECARCNS HLGHIFDDGP APTYKRFCMN SVSLDFDPDV K