Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6049 |
Symbol | |
ID | 8362231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7647086 |
End bp | 7647601 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644968183 |
Product | methionine-R-sulfoxide reductase |
Protein accession | YP_003125662 |
Protein GI | 256425009 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0487159 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.218402 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCAG GATTTATCAT TGTATTCGTT TCCCTGCTGC TATCAGCCTG TCAGGGGAAT GCACAAAAGA AGAAAGATAT GAACAAGGAA AACAACCCAT ACTACTCACG TACTGACACG AGCCATCTGA ATGTAAGCAA TGCAGAATGG AAGAAGATTC TGCCTTCGGA TCTCTATAAC GTATCCAGGG AGCAGGGTAC TGAGCGCGCC TTTACCGGTG AATACTGGGA TAGTGAAGCG AAAGGTACTT ACTACTGTGC GGTGTGCGGT AATAAACTGT TCAGATCTGA TGCGAAATTT GCAAGCAGTT GTGGCTGGCC GAGTTTCTTT GAACCAGTGC GGGAGAACAG CGTGATCTAT AAGGATGATA ACTCGTATGG TATGCATCGT ATCGAAGTAG AGTGTGCCAG ATGTAACTCT CACCTGGGGC ATATCTTTGA TGACGGTCCC GCACCCACGT ATAAAAGGTT TTGTATGAAC TCCGTATCAT TGGACTTTGA TCCGGATGTG AAGTAA
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Protein sequence | MKAGFIIVFV SLLLSACQGN AQKKKDMNKE NNPYYSRTDT SHLNVSNAEW KKILPSDLYN VSREQGTERA FTGEYWDSEA KGTYYCAVCG NKLFRSDAKF ASSCGWPSFF EPVRENSVIY KDDNSYGMHR IEVECARCNS HLGHIFDDGP APTYKRFCMN SVSLDFDPDV K
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