Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_6026 |
Symbol | |
ID | 8362208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7623653 |
End bp | 7626016 |
Gene Length | 2364 bp |
Protein Length | 787 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644968162 |
Product | alpha-L-rhamnosidase |
Protein accession | YP_003125641 |
Protein GI | 256424988 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAAAT TACTCAGTGT GGTAGCGCTC TGCCTTCTTT TGCTACCCGA CTTCAGCTAT GCACAATCCG CTGTGTATGC CTCGCAGAGC AGGCCATGGA ATGCCAATTG GATTGCGCCA CAGAATGAGT CCGGCAACAA TTATGGGGTC TACTATTTCA GGAAAAAAAT TGATCTCCCT GCAAAACCGT CCAGCTTCAT TATCCATGTA TCAGCCGATA ACCGCTATAA GTTATATGTT AATGGCATAT TGGTCTCTTT AGGGCCCGCC CGTGGTGATA CCTATTACTG GAATTATGAA ACGGTAGATC TCGCTCCCTA CCTGACTGCC GGTAAAAATA TTGTGGCAGC CCTCGTCTTT AATGAGGCCG AAAACCGTCC TGAAGCACAG ATTTCAGTGA GAACGGCTTT TATCTTACAA GGAAAGGGAC CGGAAGAAGA AATCTTAAAT ACCAATAATT CCTGGAAATA TACACGCGAC AACGGCTATC AGCCGATTAC CGGCTTCTTT GCCGCCAGTA CCGGCGAATT CGTAGATATG AACCAATCCG TTAAAGACTG GACAAGTCTC GATTTTAATG ACCACAACTG GCCTGCCGCC GCTCACCTGT TCCAGGGACA TATCAAGGGC GATGGGGATG GTTTAGCCTG GATGCTGGTA CCCTCCTCTT TACCACAGAT GGAACTGACG CAGCAACGAT TACCGCTTGT CAGGAAGACA ACCGGTATTA CACTGCCCGA AACTTTCCCT GCTTCGAAAA CAGCCATTAC CATTCCTGCT GATACAACAG TATCCTTTAT CCTGGACCAG ACTTTCCTGA CCAATGCCTA TATTAACCTG CACTTCAGTA AGGGTAAAAA TGCCGGCATA TCCATGCGTT ATGCTGAATC CCTTTATGAT GATGCGGCAA AGTATGGCGA CCGTAAAGGC AACCGCAATG ATGTGGATGG TAAAGACTTC AAAGGCAGAA AAGACAGCCT GGTATCAGCC GGCGATATGG GACAGTCTTA TACGACGCTA TACTGGAGAA CCTTCCGTTA TATCCTGGTG ACAATACATA CGCAGCAGGA GCCATTGATA ATAGACGACA TCTCCGGTGT ATTTACCGGC TATCCCTTTA CATTTAACGC AGCTTTTAAT ACACAGGATA ATGAGTTAAA ACAGATATTG GATATCGGCT GGCGTACTGC CCGTCTATGC GCTATGGAGA CCTATTTCGA TTGTCCTTAT TATGAACAGT TGCAGTACAT AGGCGATACG CGTATACAGG CGCTGATCAG CTACTACAAC AGCGGTGACG ACAGACTGGC ACGCAATGCC ATCGACCTGA TGGATCATTC CCGTATTACT GAAGGCGCCA CACAAAGCCG CTGGCCAACC CGTAGCACGC AGATTATATC CACCTTCTCC TTATGGTATA TCGGTATGTT ACACGATTTC TGGATGTACA GACCTGACAG TAGTTTTATC CGAAGTAAAC TGACAGGAGA ACGTGCCGTA CTCGACTTTT TTAGCCGCTA CCAGGGCCAG GACGGTTCCT TGAGAAGTAC TCCTTACTGG AACTTCATAG ACTGGGTCGG TGGCAAAGGA TGGAACTTTG CCATGCCGCC TAAAGGCGCA GACGGAGCAT CCGCGATCCT TGATCTGCAA TTACTGATGG CCTACCAATG GGCAGCCGAA CTCGAAGCCA GCATGGGGAT GCCCGCATAT GTCGCTTTGT ACAAAAGCAA GGCAGCCCTG CTAAAAACAA CCATCCGGAA CAAATACTGG AATGCCGGCA GAAAACTATT CGCAGATACT GACGAAAAAG ACGTCTATTC ACAACACGCC AATGCACTCG CTATATTGGC GGGTGTAGCC AATCAGCAGG ACCTGTCTGA CATCTGCCAG CAACTGCTGA CGGATAAATC CCTCACACAA TGCACCATCT ATTTCAAATA TTACCTGCAC CTGGCACTGG CCAAAGGTGG CCTTGGTAAT GATTACATCA AATGGCTGGA TGTATGGCGG GACAATATCA AAATGGGATT AACCACCTGG GCCGAAATAT CCGATCTGCC CAACAGCCGT TCCGACTGCC ACGCATGGGG CGCCAGTCCT AACATCGAAT TCTTCCGGAT GATCCTGGGC ATCGACACCG ACGGACCAGG CTTCCGCAAA ATAAAAATAA CGCCGCACCT GGGAGATTTG AAGAATATCA GCGGAGAGAT CCCGCATCCA AACGGAAAGG TCGCTGCTAC TTATACTTTC GACAGGAATA AGTGGAAAAT AAAAATCCAC TTACCGGCGA AAACTACCGG CACCCTGCTA TGGAAAAACA AAAAGTATCC GCTTAAAACC GGAGAGAATT TATTAGAGAT CTAA
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Protein sequence | MKKLLSVVAL CLLLLPDFSY AQSAVYASQS RPWNANWIAP QNESGNNYGV YYFRKKIDLP AKPSSFIIHV SADNRYKLYV NGILVSLGPA RGDTYYWNYE TVDLAPYLTA GKNIVAALVF NEAENRPEAQ ISVRTAFILQ GKGPEEEILN TNNSWKYTRD NGYQPITGFF AASTGEFVDM NQSVKDWTSL DFNDHNWPAA AHLFQGHIKG DGDGLAWMLV PSSLPQMELT QQRLPLVRKT TGITLPETFP ASKTAITIPA DTTVSFILDQ TFLTNAYINL HFSKGKNAGI SMRYAESLYD DAAKYGDRKG NRNDVDGKDF KGRKDSLVSA GDMGQSYTTL YWRTFRYILV TIHTQQEPLI IDDISGVFTG YPFTFNAAFN TQDNELKQIL DIGWRTARLC AMETYFDCPY YEQLQYIGDT RIQALISYYN SGDDRLARNA IDLMDHSRIT EGATQSRWPT RSTQIISTFS LWYIGMLHDF WMYRPDSSFI RSKLTGERAV LDFFSRYQGQ DGSLRSTPYW NFIDWVGGKG WNFAMPPKGA DGASAILDLQ LLMAYQWAAE LEASMGMPAY VALYKSKAAL LKTTIRNKYW NAGRKLFADT DEKDVYSQHA NALAILAGVA NQQDLSDICQ QLLTDKSLTQ CTIYFKYYLH LALAKGGLGN DYIKWLDVWR DNIKMGLTTW AEISDLPNSR SDCHAWGASP NIEFFRMILG IDTDGPGFRK IKITPHLGDL KNISGEIPHP NGKVAATYTF DRNKWKIKIH LPAKTTGTLL WKNKKYPLKT GENLLEI
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