Gene Cpin_6001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_6001 
Symbol 
ID8362183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7603816 
End bp7604259 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content46% 
IMG OID644968137 
ProductActivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_003125616 
Protein GI256424963 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTACCA GATTACCAGT ACAGGCTGTT GCTACCGCTT TGTTTTCTGT ATCGCCTGAA 
CGCGTTTTTG ATGCATTCCT CAGTACGGAA ATGGTGGGGA AGTTTATGTT TGGTCCTCAG
TTGCGCGATG AAGAGATTGT CAGTCTGAGC AATGAGCCAT GGGAGGGAGG AAGTTTCTCT
TATCTTGTTC GCCGGCAGGG CGAATTAATC AATCATATCG GTAAATATGT AGAGATCGCA
TATCCGCGGC GTCTGGTATT CACCTGGCAG ATAGAGGAGG AAGGATCTGA TACGTCAGAG
GTTATAATAG AGATAGCTTC CATCATTGAC GGATGTGAAC TTACGCTAAC CCATGAAATG
TCCCGCAAAT GGGAGGATTT TGCAGCACAA TCCAAAGCTG CGTGGGGCAA GATGCTGGAT
AAGCTGACGG AAGTGTTACA ATAA
 
Protein sequence
MTTRLPVQAV ATALFSVSPE RVFDAFLSTE MVGKFMFGPQ LRDEEIVSLS NEPWEGGSFS 
YLVRRQGELI NHIGKYVEIA YPRRLVFTWQ IEEEGSDTSE VIIEIASIID GCELTLTHEM
SRKWEDFAAQ SKAAWGKMLD KLTEVLQ