Gene Cpin_5989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5989 
Symbol 
ID8362171 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7595164 
End bp7595565 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content46% 
IMG OID644968125 
Producttranscriptional regulator, HxlR family 
Protein accessionYP_003125604 
Protein GI256424951 
COG category[K] Transcription 
COG ID[COG1733] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAAA TTAAAGCTAC TTCTACCAAT AATTTAAACA GACAGCTCTT CCTGGATTGT 
AGTCTTACCT ATGCTTTGCA GTTGGTCGGC GGGAGATGGA AACTGCTGAT TTTGATGGAG
CTAAGTTCAG GGGCTAAGCG CTATAATGAA CTGAAGAAGA ACACACCCAA CATCACTGAA
CGAATGTTGA CATTACAGCT ACGCGAATTA GAGGCAGATG GTTTGGTGGT GCGAAAGGTG
TATGCGGAAG TACCGCCCAA AGTGGAGTAT ACACTAACGG CTATCGGTCA TGAACTCACA
CCCATCTGTA TGCAGTTACA TGGTTGGGGG GAGCGTCATA AGGACAACGC GGCATCTAAG
ATGCAGACGG TAGCTTTCGA TGCTGTTTCT GTCTGCAAGT AG
 
Protein sequence
MAKIKATSTN NLNRQLFLDC SLTYALQLVG GRWKLLILME LSSGAKRYNE LKKNTPNITE 
RMLTLQLREL EADGLVVRKV YAEVPPKVEY TLTAIGHELT PICMQLHGWG ERHKDNAASK
MQTVAFDAVS VCK