Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5989 |
Symbol | |
ID | 8362171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 7595164 |
End bp | 7595565 |
Gene Length | 402 bp |
Protein Length | 133 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644968125 |
Product | transcriptional regulator, HxlR family |
Protein accession | YP_003125604 |
Protein GI | 256424951 |
COG category | [K] Transcription |
COG ID | [COG1733] Predicted transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 44 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTAAAA TTAAAGCTAC TTCTACCAAT AATTTAAACA GACAGCTCTT CCTGGATTGT AGTCTTACCT ATGCTTTGCA GTTGGTCGGC GGGAGATGGA AACTGCTGAT TTTGATGGAG CTAAGTTCAG GGGCTAAGCG CTATAATGAA CTGAAGAAGA ACACACCCAA CATCACTGAA CGAATGTTGA CATTACAGCT ACGCGAATTA GAGGCAGATG GTTTGGTGGT GCGAAAGGTG TATGCGGAAG TACCGCCCAA AGTGGAGTAT ACACTAACGG CTATCGGTCA TGAACTCACA CCCATCTGTA TGCAGTTACA TGGTTGGGGG GAGCGTCATA AGGACAACGC GGCATCTAAG ATGCAGACGG TAGCTTTCGA TGCTGTTTCT GTCTGCAAGT AG
|
Protein sequence | MAKIKATSTN NLNRQLFLDC SLTYALQLVG GRWKLLILME LSSGAKRYNE LKKNTPNITE RMLTLQLREL EADGLVVRKV YAEVPPKVEY TLTAIGHELT PICMQLHGWG ERHKDNAASK MQTVAFDAVS VCK
|
| |