Gene Cpin_5976 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5976 
Symbol 
ID8362158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7582069 
End bp7582461 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content37% 
IMG OID644968116 
ProductOsmC family protein 
Protein accessionYP_003125595 
Protein GI256424942 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1765] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAATG TAATTTCAAC TGCTTATCAG GGAAAATTCA AAGCCACTAC AGAAGCACCC 
CTGAATGACA ACCCTATAAC AGTAAATGCT GTTCAATTTT CTCCGGTAGA TCTGTTAATC
AGCGCCTATG GCAGCTGTTT ATTAGGGACC ATTGACTACG TAGCTCAAAC GAAACTTTTT
GAAGTAAACA ATTCAAAAAG TGAAATTACC TATGAAATGA GTACGACAGG AAGTGGCGTT
GGGAAAATTA ATATCAAACT GTTCTTTAAA GATGATTATT CGGCAGAACA GCGGGAAGTA
ATTGAAAATG CAGCAAAGAA GCAATGTCAT GTGGGTAATA CGATTGATGC CAGAATTGAA
AAAGAATTTC AATTTATCTA CAGCCATAGC TAA
 
Protein sequence
MSNVISTAYQ GKFKATTEAP LNDNPITVNA VQFSPVDLLI SAYGSCLLGT IDYVAQTKLF 
EVNNSKSEIT YEMSTTGSGV GKINIKLFFK DDYSAEQREV IENAAKKQCH VGNTIDARIE
KEFQFIYSHS