| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5972 |
|---|
| Symbol | |
|---|
| ID | 8362154 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 7578656 |
|---|
| End bp | 7579705 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644968112 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_003125591 |
|---|
| Protein GI | 256424938 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1231] Monoamine oxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.824241 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAC ATATTATTAT CGTTGGTGGG GGCTTAAGTG GTTTATCACT AGCCTGGTAC
TTAACTAAAA AAAACAAAAC AGTTACTATA CTTGAAGCAA CCACCAGGTT AGGTGGCAGG
ATAGAAACAA TAGCTGGGAA AACAGGAACA CCACTTGAGT TAGGTGCGAC ATGGTTTTCA
GATATGCATA GCAAATTAAA AGAATTAATT GATGAGTTAG GCCTGGATAC CTTCCCGCAG
TTTTCCGGCG GCATTTCCCT ATTTCAAACC AAGTCCTTTG AGCCCCCACA GCAATTTTTT
ATTACTGCTG CTGAACAACC ATCCTATAGA ATTGCAGGAG GTACATACAA GCTAATTGAA
GCATTATTAA ATAAATTAAA AGGACAAACC ATTATTACTG ATAATGCTGT CACAAAAATA
GACGCCGGGC AATATCCCAT AAATATTACT ACGAATAATG GGGAAGTTTA CACTGGGGAT
AAAGTCGTGT TATGTATGCC CCCTCAGCTA ATAGGTGACC AAATCAATAT CTTGCCCAAA
CTATCCGGGG AACTGTCTTC ACTGCTGTCC ACAGTTCATA CCTGGATGGC AGGTTCAGTA
AAATTTGTAC TGGAATATAA TCACCCCTTC TGGCGAAATA GTGGCTATTC CGGCATGCTA
TTCAGCCATG CCGGTATTGT TACAGAAATG TATGATCATA CAAATTTTGA AGAAAATAAG
TTTGGCTTTA CTGGATTTCT AAATGGAGGA GCCGCCGGAT ATGAATATTC AATACGGAAA
CAACTCGTAC TGGAGCAATT ATCCGGCCTG CTTGGCAATA AAGCGATGGA GCCACTTTCT
TATAATGATA AAATTTGGTC TGACAAATTT ACAATAACCT CACCACAGGT CATCCGATAC
CCTCATCAGC ATAACGGACA TGAACTGTTG CAGTCGGGTT ATATGGACGG AAGATTGTTC
TTTGGAGGTT CTGAAACATC CTCTAATTGT CCTGGATATA TGGAAGGTGC AGTCGTAGCC
GCACATCGCG TGGCGACGAA TATTAATTAG
|
|---|
| Protein sequence | MSEHIIIVGG GLSGLSLAWY LTKKNKTVTI LEATTRLGGR IETIAGKTGT PLELGATWFS
DMHSKLKELI DELGLDTFPQ FSGGISLFQT KSFEPPQQFF ITAAEQPSYR IAGGTYKLIE
ALLNKLKGQT IITDNAVTKI DAGQYPINIT TNNGEVYTGD KVVLCMPPQL IGDQINILPK
LSGELSSLLS TVHTWMAGSV KFVLEYNHPF WRNSGYSGML FSHAGIVTEM YDHTNFEENK
FGFTGFLNGG AAGYEYSIRK QLVLEQLSGL LGNKAMEPLS YNDKIWSDKF TITSPQVIRY
PHQHNGHELL QSGYMDGRLF FGGSETSSNC PGYMEGAVVA AHRVATNIN
|
|---|
| |