Gene Cpin_5967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5967 
Symbol 
ID8362149 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7575117 
End bp7576166 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content37% 
IMG OID644968107 
ProductAlcohol dehydrogenase zinc-binding domain protein 
Protein accessionYP_003125586 
Protein GI256424933 
COG category[R] General function prediction only 
COG ID[COG1064] Zn-dependent alcohol dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.283316 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAT TAATTATCTC TAAAGGATAT GCAGCAACGA ATGATACAGA TCCATTAGTT 
CCTTTCACTT TTGAAAGAAA GGAACCTGGT GTTGAGGAAG TATTAATTGA CATATTGTAC
TGTGGTATAT GCCATGCAGA TATTCATCAA TCAAAGAATG AATATGGGCG TACGAAATAC
CCATTTGTTC CAGGACATGA AATTATTGGA CGTGTACATT CAATCGGTAG TCAGGTAAGA
AATTTTATAA TAGGCGATTT GGTAGGTGTA GGATACTTTA TCAATTCCTG CGGACATTGT
GTCAATTGTG TAAATCACGA AGAACACTTT TGTGATAATG GTATGATGCC TACACATAAT
GGAGTCCTTC CTGATGGTAG TACGACGAAA GGTGGCTATT CAAATTGCAT TGTAGTAAAA
GAAAAATATA TTCTGAAAGT TTCAGAAAAA CTTCTATTGC CAGCGGTTGC ACCTCTTCTG
TGTGCAGGGA TTACTACTTA TTCAGCAATA AAACATAATC AGATTGGCAT AGGACATAAG
GTAGCTATAC TCGGATTGGG AGGGTTAGGC CACATGGCGG TGAAATTTGC CCGGTCATTT
GGGGCCATTG TTACTGTATT GAGCAGTGGT GTATCTAAGA AAGAAAGTGC TTTTGAACTG
GGTGCTCACA ATTTTGTTCA CACAGATGAT GAAGCCCGGT CCAAAATGGA AATAGGAAGT
TTTGATTTTG TTATAGATAC AGTGTCTGCC AGACATGATT ATAATAAGTA TTTAAATCTG
TTAAGGAAAG ATGGAACATT GGTTTTATTG GGAGTACCAC CTGAAATAAC GCCTATTCAT
CCTGGTTTGC TAATCTTTCG CAGAAGGAAG GTAGTTGGAT CTTTTATTGG TGGAATAGAA
GAAACACAGG AAATGCTTGA TTACTGTGCA ACGCATAATA TTACAGCAGA TGTTGAAGTC
ATACAGCCGG ATTATATTAA TACTGCTTTT GAAAGAATGC TTAAAGGTGA TGTGAAATAC
CGGTTTGTGA TTGATATGTC AGGATTATAG
 
Protein sequence
MGKLIISKGY AATNDTDPLV PFTFERKEPG VEEVLIDILY CGICHADIHQ SKNEYGRTKY 
PFVPGHEIIG RVHSIGSQVR NFIIGDLVGV GYFINSCGHC VNCVNHEEHF CDNGMMPTHN
GVLPDGSTTK GGYSNCIVVK EKYILKVSEK LLLPAVAPLL CAGITTYSAI KHNQIGIGHK
VAILGLGGLG HMAVKFARSF GAIVTVLSSG VSKKESAFEL GAHNFVHTDD EARSKMEIGS
FDFVIDTVSA RHDYNKYLNL LRKDGTLVLL GVPPEITPIH PGLLIFRRRK VVGSFIGGIE
ETQEMLDYCA THNITADVEV IQPDYINTAF ERMLKGDVKY RFVIDMSGL