Gene Cpin_5966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5966 
Symbol 
ID8362148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7574695 
End bp7575090 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content37% 
IMG OID644968106 
ProductOsmC family protein 
Protein accessionYP_003125585 
Protein GI256424932 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1765] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.136063 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCGA CAGTAGAATC AAGGTATCTT GGAAATGGCA AATCATCAAT TGTGTCTCCA 
TTAAATACTG AAGCATTAAA TGCCGATTCC GAAAATTTCA GGCCTATGAA TTTTTTAGTA
GGTGGTTATG GGACTTGTAT GATGAGTGTG ATGGATATGA TAGCGGGCCA AAATGGATTT
AATCTTTCAG AAGCGAGAAC GGAGATTAGA TTTTCGCCAA TGCCTGATAT GAGTAGATTA
GATACAATAG ATATTAAATG CTTTATTAGA AAAGGGGATT ACAATGCTGC GGAAAAACAA
ATTCTGGAGG ATGCAGCGAC AAAGATGTGT CCTATAGGAA ACAGCCTGAA CCCGGAAATT
AAACGTTCTT ATGAATTTGT TTATGGAGTA GAATAA
 
Protein sequence
MQPTVESRYL GNGKSSIVSP LNTEALNADS ENFRPMNFLV GGYGTCMMSV MDMIAGQNGF 
NLSEARTEIR FSPMPDMSRL DTIDIKCFIR KGDYNAAEKQ ILEDAATKMC PIGNSLNPEI
KRSYEFVYGV E