| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5961 |
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| Symbol | |
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| ID | 8362142 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7568420 |
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| End bp | 7569571 |
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| Gene Length | 1152 bp |
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| Protein Length | 383 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968100 |
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| Product | glycoside hydrolase family 76 |
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| Protein accession | YP_003125580 |
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| Protein GI | 256424927 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4833] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.803329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.303937 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTC CACCGATTGC GGCATTACTC CTGGCCCTTA CTATGGCCAG CTGCGGAAAA
AAGGAGATCA GTAGCATAGA AAAGCTGTCC ACCAAAACGA CTACCAAAGG TCTGATGACC
GTCAATTCCG TACAACCCGT ACGCTCAGAA GCCCTGTTAG CCATGCAGTG CTATAACAAT
GCATTTTACA ATCAATATGG CACCTATGGC TCGTCTTTCA AAGCCTATTA CTATTCTGAC
GTCAACCGTA CCGGTAGAAT GGATTTCTGG CGACAGGCAG AAGCGATTGA AACCTTAATA
GACGCCTACA ACGTCAACAA TGACGCTGAT CTCCGTAACA AAATGGTCTA CCTCTATAAC
GGTATGCGTG ATGCCTACGG CCTACTCTGG ACCTCCAATA CCTTCAATGA CGATGTCATT
TGGGGCGCTC TTATGTGTGT ACGGGCCTTT CTTATCACCA ACGACGGTGG GATGAAGGAT
ATGGCTAAAA ACAACTTTGA CATGGTCTGG AACCGTGCCT GGGATACCAA CCTTGGCGGC
GGACTATGGT GGACGACTGC CAAGGCCACT AAAAATGCCT GTGTAAATGC GCCTGCCGCC
ATCTGCGCAA TGTATCTCTA CCAGGTAACC GGCGATGTCA ATTACCGGGA TAAAGCGAAA
ATGATCACCG ACTGGATGAT CAGCCGTCTG TACGTATCCG CCACCGGTGA AGTCAAAGGT
GCAATCAATG CTGCCGGTAC CATCACCGAA GGCTCCCGTA CCTATACACA AGGGACATTT
ATCGGCGCCT GCAGTATGCT GCACAACGCC TATCCTTCCT CTAATTTTAA AGCCATGGGA
ATGAAGGCCA TGGACTACAC GAAAAATAAT ATGTGCAACG CACAGGGACT CATGCCTGAT
GAGTATGACT GCGACGACTG CCAGGGATTT AAAGCCATCT TCGCCCGTTG GGCCTGCAGA
TTTGTGAAAG ATCATAATTT GCAGACGAAT TACGCCACCT GGTTGAATTA CAACGCCGCA
GAGGCATGGA ACTACAGAAA TTCGAACGGT TTGATGTGGG GTCAATGGTG GCGAAGAACA
CCGGATACCT ACGTAAATTC ATTTGAGACC ACTTGTGGAG TCGCAATGAT GAATGGCGTC
TGGGTGTTCT AG
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| Protein sequence | MKIPPIAALL LALTMASCGK KEISSIEKLS TKTTTKGLMT VNSVQPVRSE ALLAMQCYNN
AFYNQYGTYG SSFKAYYYSD VNRTGRMDFW RQAEAIETLI DAYNVNNDAD LRNKMVYLYN
GMRDAYGLLW TSNTFNDDVI WGALMCVRAF LITNDGGMKD MAKNNFDMVW NRAWDTNLGG
GLWWTTAKAT KNACVNAPAA ICAMYLYQVT GDVNYRDKAK MITDWMISRL YVSATGEVKG
AINAAGTITE GSRTYTQGTF IGACSMLHNA YPSSNFKAMG MKAMDYTKNN MCNAQGLMPD
EYDCDDCQGF KAIFARWACR FVKDHNLQTN YATWLNYNAA EAWNYRNSNG LMWGQWWRRT
PDTYVNSFET TCGVAMMNGV WVF
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