| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5951 |
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| Symbol | |
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| ID | 8362132 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7554932 |
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| End bp | 7557859 |
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| Gene Length | 2928 bp |
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| Protein Length | 975 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644968090 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003125570 |
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| Protein GI | 256424917 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.580279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0504112 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAAGG TCCGTTATAT ATTCTTATGG TGGATGTTAA TGGTCCTGAG TACAGGTTAC
CATGCTGTTG CTCAGGGACT GATGATCCGT AACTATAACG TAAAGGATGG CCTGGCGAAT
GCCACTGTCT ATGCGGCAGT ACAGGATAAG GAAGGATTTA TCTGGTTTGC TACCCCCACC
GGCGTCAGTA AATTTGACGG AAAACGCTTT CGCAATTATT CTAAAAAAGA CGGCCTCACC
GACAATGACG TCGTAAAACT CTCTGCGGAT TCCAAAGGGC GTGTCTGGTT TTCAACGCTT
AACGGACAAC CCTCTTTCTA CTGGAATTCT ACTATTCACA CCGGACAGAA TGACTCGTCC
CTGCACGTGG ATGCCCGCGG ACAGTACATG CAGTTCATGT TTGAAGATTA TGCCGGCTTT
ATCTGGTTCC TTAATACAGA CAACAGGATC ATCCAGTATA GCGGCAGAAA GACCACCTAC
GATAAACTAG GTGCGCAACG TACGGACCTT TTCTATTTTC TCCGGAACGA TACCATCTTC
AAGCCCTTGC AGCCATACTT TAATATGGTC AACCTCAGAG ACAGTTACAA CCCGGATCAA
CATATTCTCA GCGCCTGTAA TTTTCCGATG GAACGTGCAG CTGCAGAAAG AGCCCGTTCT
TATCCCGTGA TCATTGTTGA CAATAATCTT TATACCTACA GCAACAAGGA AGCTATCTGC
TTTTTTAATG GTGATGACTG GGGTATCCGG GAAGAGATCA GTAATATCTG TGTCGACAAT
GACAACCTCT GGATCGGTAC ACCCCGTGCC CTGTATTATC TGAAAGGGTT TTTTAAGGGA
GAAAGAAAAC CGGTCAAATT ACTGCAGAAC CACTATATCA CCTCATTGCT GAAAGATCGG
GATGGCAACA TCTGGATCAC TACGTTCGGA GACGGTGTAT ACAATATCCC CTACAAGAAT
TTTTACTTCA ATTACCTGGA CAATACCAAC GGACTGTACT CGCACTCCAT TTTCAGTATT
GCCAAAGACC CGAATACCGG AACGCTGCTG GTAGGCCAGA ATGCGGGGGT ACTTAATACT
ATCGACAAGA ATAATAAGAT ACGTCAGTTT AACCTCGATA CCACCAGCGG GCGTAATAGT
ATTGTCAGTA TACTGCCCTA TAAGCCCAAT GAAATGCTCA TTGGGGCAGA CAACGGTCTT
TTCGTTTTCA ATACACTCAA ACAGAAAGCA TCGCTGCTGA AACCTATAAA GACATTAAAA
GATGTAGATA TCGCTCCCGG AGGCAAGGTT AGGCTAGTGA CCAAAGACCA GGTGATCACA
GATGATTATA GCGTAGGGGT GGAGGATGAC CTGATTACTT CTATTACCAG TATTAATGAT
TCTGCTTATT ATGTAGGTAC AAATGCCGGT TTGCTGTACG GGAATGATGC ATTACGCACC
TTACGTATAC CCGGAGAAGA TTCTGCCCTG CACAGGAGTA TTAAAGATCT GAAGTGGATT
GATGGTAACC TCTGGATCGG CACCAGCGAC AATGGCTTGT ACGTACTCCA CAACAACAAA
GTGATCAAAC ATCTGAGTAC TGCGGATAAA CTGGTCAGCG ATATCTGCCA GCAGCTGTAT
TATGATGGTA TCGGCCGGCT GTATGTTTCG ACCAACAAGG GTGTTTCTGT CATTGATGTC
AAAACCCAGT CACTGATCCG GAATATTACT TCGAATGATG GCCTGATGAG TGATGATACC
CGTGGGGTGT ATTACCAGCA GGGTATCTTA TATATAGCCA CATCCAACGG CCTCAGTTAT
TTCCAGGATG ATAAGATGCC TCTGGACACA GTACCACCAG CTATTTACCT GAATCATGTA
CGTTACGGTG ACAGCACCTA TCTGCCAGGG AAACAGTTTG TGCTGCTGTA TCAGCGTAAG
GCGTCTTTTG AGGTAGAATT CGGGGCGATC GCCTATGATC TGCCTGACCT CGTTGAGTAC
CAGTACAACT TTTCCAGCGA TACCTCCAGC GGATGGATCA CGACAATGTC CAATATCGTA
CCTTTCCCCG ACCTGCAACC AGATACGTAT CAGTTGCAGA TCAGGGCCAG AAAATACAGG
AGCAACTGGA GCCAGCCGGT AAGCATCACG GTAACGATAC TACCACGGTG GTACCAGCAG
TGGTGGGCGA GAGGGATACT CATTCTCCTC GGACTGACAC TGGTAGCTTT CGTACTGAGA
GATGTGATCA GAAGGATCCA GCGGGCAGAA ATGCGGAAGA CTGAGTACAA CCGGCGGATT
GCTGAACTGG AAGCCAAAGC CCTGACCAAT CAGATGAACC CTCACTTTAT CTTCAACTCC
CTGAATTCAG TGCAACACCT GATCATGGAA AAAGAAGAGA AACAGGCGCT CAACTTCCTG
GCAGACTTTG CCACCCTGAT GCGGCAGATG CTGAACAATT CCAGGAAGTC GCATATTTCC
CTGGAAGAAG AGATCGCTTT CCTGACCCGG TATATCGAGC TGGAAAAGAT CCGGTTTGCG
AATGTGTTCA CTTACCAGTT TATTTTACAG GATGACCTGA AAGATTATAC GATCTATATA
CCTCCTATGA TTATTCAACC CATTGTGGAA AATGCTATTA AACATGGACT GGCGCCTAAA
AACGGCAGCG GCAGACTGGA AATGAAACTG GTGCTCCGGG AGGATATGTT ATACTGCTCC
GTGGACGACG ATGGGATAGG TTGGGAACGT GCCAATGAGA TCAAAAGTGG CCGTCTGATA
AAGCACGAAT CCACCGCTTT GAGTGTGATT AGGGAAAGGT TGCAGATTAT AAAATCTTTT
AATGGAAATG TTGGAAAGTT AGAAATAATT GATAAATTTA AGTCTGGTTT CGGCAATAAG
GAGGGTACCC TGGTTGAAAT ACTGATTCCC ATTGTTAAGA TGTTATGA
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| Protein sequence | MPKVRYIFLW WMLMVLSTGY HAVAQGLMIR NYNVKDGLAN ATVYAAVQDK EGFIWFATPT
GVSKFDGKRF RNYSKKDGLT DNDVVKLSAD SKGRVWFSTL NGQPSFYWNS TIHTGQNDSS
LHVDARGQYM QFMFEDYAGF IWFLNTDNRI IQYSGRKTTY DKLGAQRTDL FYFLRNDTIF
KPLQPYFNMV NLRDSYNPDQ HILSACNFPM ERAAAERARS YPVIIVDNNL YTYSNKEAIC
FFNGDDWGIR EEISNICVDN DNLWIGTPRA LYYLKGFFKG ERKPVKLLQN HYITSLLKDR
DGNIWITTFG DGVYNIPYKN FYFNYLDNTN GLYSHSIFSI AKDPNTGTLL VGQNAGVLNT
IDKNNKIRQF NLDTTSGRNS IVSILPYKPN EMLIGADNGL FVFNTLKQKA SLLKPIKTLK
DVDIAPGGKV RLVTKDQVIT DDYSVGVEDD LITSITSIND SAYYVGTNAG LLYGNDALRT
LRIPGEDSAL HRSIKDLKWI DGNLWIGTSD NGLYVLHNNK VIKHLSTADK LVSDICQQLY
YDGIGRLYVS TNKGVSVIDV KTQSLIRNIT SNDGLMSDDT RGVYYQQGIL YIATSNGLSY
FQDDKMPLDT VPPAIYLNHV RYGDSTYLPG KQFVLLYQRK ASFEVEFGAI AYDLPDLVEY
QYNFSSDTSS GWITTMSNIV PFPDLQPDTY QLQIRARKYR SNWSQPVSIT VTILPRWYQQ
WWARGILILL GLTLVAFVLR DVIRRIQRAE MRKTEYNRRI AELEAKALTN QMNPHFIFNS
LNSVQHLIME KEEKQALNFL ADFATLMRQM LNNSRKSHIS LEEEIAFLTR YIELEKIRFA
NVFTYQFILQ DDLKDYTIYI PPMIIQPIVE NAIKHGLAPK NGSGRLEMKL VLREDMLYCS
VDDDGIGWER ANEIKSGRLI KHESTALSVI RERLQIIKSF NGNVGKLEII DKFKSGFGNK
EGTLVEILIP IVKML
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