| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5933 |
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| Symbol | |
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| ID | 8362114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 7529170 |
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| End bp | 7533954 |
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| Gene Length | 4785 bp |
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| Protein Length | 1594 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644968072 |
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| Product | protein of unknown function DUF490 |
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| Protein accession | YP_003125552 |
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| Protein GI | 256424899 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2911] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.290241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGAGTT TACTGGGCCT TGTTATCCTG ATAAGCGTCC TGGTAAATAT TCCGGTGGTA
CAGAACTTCC TGGTACATGA GGCCACAAGC CGGTTATCCC AACAACTGAA AACCAAAGTT
GAAATAGAGC ACGTCAATAT TCGGCTCTTT AACAGTCTGC GGCTGGAGGG TACCCTGATT
GAGGACCGTC ACAAGGATAC CTTGTTGTAT GCCCGCGTAC TGCAATTGCG TATTACAGAC
TGGTTCTTCT TCCAGGAGAA GCCTGTACTG AAGTTCATCG GATTGGAAGA TGCAGACGTG
AACCTGATCC GCCACAGGAA TGATTCACTA TGGAATTATC AGTTCATCAT CGATGAATTC
AGCGCGCCGC CAGATACCAC CCGCAAGAAA AAAGAAGGAA GCGGAGGCGT TTCCCTTGAC
CTGCGTAAAA CGGACCTGCG TAATGTCCGT ATTAACCAGA TCGATGCCTG GATCGGCGAA
GACATGCGTG TGGCTGCTAA ACGCATTTAT GTGGATGCCA AGAACATAGA TCTTAATCTG
CATAACATTG ATATCCAGGA ACTGACACTG GACAAACCTA CGTTTATCAT TACCCGGTAC
CCGGCCTCTC CGCTGCGTAA AAAGAGACCC GCCCCTCCTG CTCCGGAGCT CACAGATACT
GCTGCCATCC CGGCTTTACG CTGGAACAGT GCCAACTGGA AACTACTGGT AAAAGAGATT
TCCATCAAGG ATGGTACGCT GGGCGTGGAT GACCTTGAAG ATGCTACAAA AATTGAAGAC
GGCTATTTTG CGCCGAATCA CATCCGTTTC AACAGCATCA ATCTCTCACT GGCGAATACC
AGTTTGGTAA AAGACAGCAT CCTTGGTGAT CTGACCATGA GCACCAAAGA GCGTTGTGGT
TTCCAGGTAA AGAAACTGAC AGCTCGCTTT AAGATGTCGC CAGTTGAAAT GGAGTTCTCC
CACATGGACC TCATGACGAA CCGCAGCCAT CTGCGGGACT ACTATACCAT GCAGTATGCT
GATATCAGCG ATATGAATGA CTATGTGAAT GCCGTTTATA TGCGCGCCCA TATCGTGAAC
AGTAAGCTGC ATTCTGATGA TATCGCGTAC TTCGCACCCA TCCTTTCAGA CTGGAAAAAA
GAGATCTTAC TCAACGGAGA CGCCAGAGGT CCTGTAAGCA ATCTGAAAGC CAACAATATA
GAACTACAAG CCGGCACAAC CACCCGCTTA CTCGGCGGCG TTGAACTGCG TGGCCTGCCG
GATATCAATA ACACTTCTAT TGATTTTCAT GCAGATGAAC TGCTGACTAC CGGTGCGGAT
ATCCTTAGTA TCGCTCCGGA GTTAAGGAAT ACAGAACCGC TGCGACTGGA CCGTCTGACC
AATATCCGCT TCGCGGGTAG CTTCACAGGG TTCGTGAATG ACTTCGTTGC CTATGGTAAG
TTCCAGACGA ACCTGGGAAA CCTGAACTCG GATATCAACT TCAAAACCAG CAAGGATATA
CCAGTGTATT CTGGTAGTCT GACCACAGAT GCCTTTAACG TGGGAAGCCT TTTAGGCGTA
CCCGAACTGA CCAGCATTTC CCTCAGTGCA AAGCTGAACG GAGAAGGTTT TAACTTTAAA
ACCCTAAAGG CTGCAGTAGA TGCAGACGTA CAACAGATCA CTCTTAACGG ATACTCTTAC
AGCAATATCA AGACGAAAGG CGATATGAAC CGTAAGTTCT TCAATGGTTC ACTGACTGCC
GATGATCCTA ACCTGGACAT GGACTTTGCC GGTACCATTG ACTTCAACGA AGAGGTACCT
GTTTTTGACT TTGACGCTGA TATCCGCCAT GGTAATCTGC GTGCCTTACA GCTGACCCAG
GACTCTATCA TGCTACAGGC AAAACTGGCA CTCAACTTTG CCGGTAGCAA TATTGACAAC
TTTAACGGTT CTGCCAGGGT ATATAACGTT TCTCTCTTCA AAGACCAGCG CAGACTGGAA
TTTGACTCCC TCAACGTGTC TACTCACTTT GAGAACAATG TGAAAGTACT GGCCATACAG
GGTAGTGAGA TCGGAGGATA TGTAAAAGGG GATTACAGTT TCATGCAATT GCCTGATGCC
TTCCGCCTGT TGCTGAACAA ATACTATCCA AGCTACTTCC CCGATGCACC AAAAGATAAT
ATTCAGCAGG ACTTCTCTTT TGCCTTCAAT CTGGGACAGG TGGACAAACT GATCCGTGGT
TTCTCCAAAG ACATTTCCGG TTTTGATAAT TCAACTATAG CAGGTTCACT AAATACAATC
AAAGGTAATC TGGGCATACA GGTGAATGTG CCGCTGGCGT CCTACAGGAA CTTCCATTTT
GAAGACCTGC AACTCAAGAG CTCCGGCACC TTCAATAAGA TCGATATCAG CACGAGCATC
GGAAAAGTTT CTTCCGGTGA CCGCGTATGG TTACAGCATC CGCTGATACT GGCAAACTCC
GGCAGAGATA CATCCTATAT AAAAGTGGAC CTGCAGGCCG GCGACTCCTC CAGTCTGGAT
GGATTCTATG CCCGGGTCGT AACTGTACCA GAAGGGGTCA AGGTAAGTTT CCTGAACAGC
GCCTTTACCG TCAACGAGCG GCAATGGAAT GTAACGCCAG GTAATGAGAT CTACTGGAGC
AAAGACTTCC TGACAATCAA CAATCTGCAG GTGACCAGGA ATGAACAGAG TATCACAGTG
GAAACCAATG AGTTCAATCC GGATGAATCC CGGTTCATCG TCAACCTGAA GAACCTCAAT
CTGACGGATG TGATCCCTTC CCAGCTGACC GCTTTACGCA TAGAAGGCTT TGCTGACGGC
AAGATTGATA TCTCTGATCC CATACATAAC CTGTCCGTTG ATGCCAATAT CACTACCAGC
GAATTACGCA TCGATAATGA CTCTATTGGT CTGGTTGCTT TTGAAGGAGG ATACAGACAG
GAAACAGATG ATGTGACCTT TTCTGTAAGA TCAGAGAATA AAGGCAAGAA CCTCTTTGCG
GAAGGACTGA TTGGTGTGTC CGAAACCAAT AACAGACTGG AAGCCAACGT AGAACTGAAC
GGTACCTCCC TCAGTATGCT GGACCGTTTT GTAAACGAAT ATGTGACGGA TCTGAAAGGC
AATGTGAGCG GAAAACTGTC TGTCGCCGGT ACGACCAAAG TACCGTCCGT ACGGGGAAAT
CTGCGTATCG ACAGTGTGGG AGTCAGGGTA TTGTACCTGG GAACCCGTTA TACGATTCCG
CGACTGAATG TAAATGTGGA CGACAATCTG ATTGAATTCG GTAATTTCTC TATTATCGAT
AAGAATAACA GCAGGGCAAG TGCCAGCGGT TACATCTCTC ATGATCATTT CAATAACCTG
AACTTCGACT TCGATGTAAC TGCCCGCAAC TTTGTATTCC TGAATACCGG GGCTGCTGAC
AGCGACCTGT TCTATGGTGA TGTGATCTCG GATGGTAAAG TCTATTTCTC CGGTCCGCTG
AATGATCTTC AATTACGCAT ACAGGCCCGA CCGGGCAAAG GCACTCACTT CTATCTGCCA
TTGTCTGATA GTAAGGATAT CGGTCGTTCA GACTATATCA CCTTTAAAAG CTATGGTACA
GAACTGAAGG AAGAAAAGAA AAAGAAGAAA GACAATGTGC GGCTGAATGT GAAACTGGAT
ATTTCGGCTA CGCCGGATGC ACAGATCGAT GTGATCATGG ATGCTGCTTC CGGTGATATG
ATCTCTGCAA ATGGTAACGG TAACTTACAG ATCATGGTAA ATACCGAAGG AGATTTCAAT
ATGTTCGGGA ACTACGAGAT CGTCTCCGGA TCTTACAACT TCACCCTGCA AAGATTGACC
AGCTGGAAAT TTGACATTGA TAAAAGCAGT ACGATCACCT GGAACGGCGA CCCTAATGAA
GCGAAAGTAG ACGTTCATGC CAAATACACC CTGCCTAAAG TCAGTCTGTA TAACCTGGTA
GGAACCGCCT CTACTGCAAG CGACAAGCTG GCTACCCGTA CCGAAAGAGT GGATATCCTG
ATCAACCTGC GTAATGAGCT GATGAAACCG GATATCACTT ATGAGATCAA TCTCCCTGAA
GTAGGTTCCC TGGCTTATGA AAGTGGTGTA GCTGCCAAGC TCCGTGAGGT GAATCAGGAC
CAGAACAAAG CCCTGCAACA GATGGCGGGC CTCCTGTTGT TCAACCAGTT CCTGCCGGAA
GATCCAAACT CCGCTGGTGG TGCAAACGTG GCAACTACCG GTAAGAACAG TGTGGGACAG
GCATTAAGTG CACAGGCCTC CGCCATCCTT AATAATATTA CCGGTGTACT GCTGAAAAAC
AGTGGTATTG GTATCAACGT AAATTATCGT GCCTATAACA TTGGTAACCA GGACAATGCT
TCTCTGGATC GGAACCAGGT AAGCGCTGGT GTAACCAGTA ACCTGTATAA CAACAGGATC
AGATTATATG TGGGTGGTGA CTATGACTGG GGTAAAGCGA ATACCTCTGC GAATGCGAAC
CGTTTCGCAG GTGACTTCCG GGCAGAGTAC CTGCTCACAC CGGAAGGACG CGTACGTATC
AATGCCTTCA GTAAATCGGA TTATGACGTC TATAACCTGG TAAACCGTAA CAAAGCGGGT
CTGGGTATCT CTTATGTACG TGAGTATAAC AAGTTCTCTG AGCTGTTCAA CGAACGGAAC
AGACGTCGTA TGCTGGACTC TATGCGCAGA GCAGAGGCAG CGAGACTGGA AGAGAAGGAA
CGGGAAGACA GAAGGGAAGA CTCGTTGAAG AGAATTAGGA ATTAG
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| Protein sequence | MLSLLGLVIL ISVLVNIPVV QNFLVHEATS RLSQQLKTKV EIEHVNIRLF NSLRLEGTLI
EDRHKDTLLY ARVLQLRITD WFFFQEKPVL KFIGLEDADV NLIRHRNDSL WNYQFIIDEF
SAPPDTTRKK KEGSGGVSLD LRKTDLRNVR INQIDAWIGE DMRVAAKRIY VDAKNIDLNL
HNIDIQELTL DKPTFIITRY PASPLRKKRP APPAPELTDT AAIPALRWNS ANWKLLVKEI
SIKDGTLGVD DLEDATKIED GYFAPNHIRF NSINLSLANT SLVKDSILGD LTMSTKERCG
FQVKKLTARF KMSPVEMEFS HMDLMTNRSH LRDYYTMQYA DISDMNDYVN AVYMRAHIVN
SKLHSDDIAY FAPILSDWKK EILLNGDARG PVSNLKANNI ELQAGTTTRL LGGVELRGLP
DINNTSIDFH ADELLTTGAD ILSIAPELRN TEPLRLDRLT NIRFAGSFTG FVNDFVAYGK
FQTNLGNLNS DINFKTSKDI PVYSGSLTTD AFNVGSLLGV PELTSISLSA KLNGEGFNFK
TLKAAVDADV QQITLNGYSY SNIKTKGDMN RKFFNGSLTA DDPNLDMDFA GTIDFNEEVP
VFDFDADIRH GNLRALQLTQ DSIMLQAKLA LNFAGSNIDN FNGSARVYNV SLFKDQRRLE
FDSLNVSTHF ENNVKVLAIQ GSEIGGYVKG DYSFMQLPDA FRLLLNKYYP SYFPDAPKDN
IQQDFSFAFN LGQVDKLIRG FSKDISGFDN STIAGSLNTI KGNLGIQVNV PLASYRNFHF
EDLQLKSSGT FNKIDISTSI GKVSSGDRVW LQHPLILANS GRDTSYIKVD LQAGDSSSLD
GFYARVVTVP EGVKVSFLNS AFTVNERQWN VTPGNEIYWS KDFLTINNLQ VTRNEQSITV
ETNEFNPDES RFIVNLKNLN LTDVIPSQLT ALRIEGFADG KIDISDPIHN LSVDANITTS
ELRIDNDSIG LVAFEGGYRQ ETDDVTFSVR SENKGKNLFA EGLIGVSETN NRLEANVELN
GTSLSMLDRF VNEYVTDLKG NVSGKLSVAG TTKVPSVRGN LRIDSVGVRV LYLGTRYTIP
RLNVNVDDNL IEFGNFSIID KNNSRASASG YISHDHFNNL NFDFDVTARN FVFLNTGAAD
SDLFYGDVIS DGKVYFSGPL NDLQLRIQAR PGKGTHFYLP LSDSKDIGRS DYITFKSYGT
ELKEEKKKKK DNVRLNVKLD ISATPDAQID VIMDAASGDM ISANGNGNLQ IMVNTEGDFN
MFGNYEIVSG SYNFTLQRLT SWKFDIDKSS TITWNGDPNE AKVDVHAKYT LPKVSLYNLV
GTASTASDKL ATRTERVDIL INLRNELMKP DITYEINLPE VGSLAYESGV AAKLREVNQD
QNKALQQMAG LLLFNQFLPE DPNSAGGANV ATTGKNSVGQ ALSAQASAIL NNITGVLLKN
SGIGINVNYR AYNIGNQDNA SLDRNQVSAG VTSNLYNNRI RLYVGGDYDW GKANTSANAN
RFAGDFRAEY LLTPEGRVRI NAFSKSDYDV YNLVNRNKAG LGISYVREYN KFSELFNERN
RRRMLDSMRR AEAARLEEKE REDRREDSLK RIRN
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