| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5926 |
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| Symbol | |
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| ID | 8362107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7520252 |
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| End bp | 7523026 |
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| Gene Length | 2775 bp |
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| Protein Length | 924 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968065 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003125545 |
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| Protein GI | 256424892 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.61038 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACACG TGGTAACCCA CCTGAGAAGC ATTGTGCTTC CATTGCTTGC ATTTTTATGC
CTGTCAACCC TTGCATACGC CCAGACAGGC ACCATCACCG GTACCGTTAC AGATGGCAGA
GGCCCTTTAG CTAATGCGAC TGTCCATATT GAACATACCA ATAAAGGTGG TTATACCAAT
GCCCAGGGGC GTTTCTCACT GGAGATAGTA CCCGGTACGC ATACGGTGCA GATCAGCTAT
GTGGGCTTTG TCGCGCAACG TAAAACGGTG ACAGTGAGCG CCGGACAAAC CACCTCGCTT
GACGTGGTAC TCGCCGCCAG TACAACCATG AATGAGCTGG TCGTACTGGG TTCGCGTAAT
CTGCCCCGTA CGCAGACGGA GACGCCTGTT CCTGTCGATG TAATCGATAT TAAAAGGATT
GCGGCCGATG CGCCACAGGT ATCCATTAAC CAGATACTCA ACTACGTAGC GCCTTCATTC
AGCTCCGGAA CACAAACCGT TGCTGATGGT ACTGACCATA TCGATCCCGC TTCCCTGCGT
GGTCTTGGTC CGGATCAGGT GTTGGTACTG GTGAATGGTA AGCGTCGTTA CAATACTGCC
CTGGTCAATG TAAACGGTAC CTTCGGTCGT GGCGCTGTAG GTACGGATAT GAACAGCATC
CCCACATCTG CGATTGATCG TGTGGAAATC CTGCGTGATG GCGCTGCCGC ACAGTATGGT
TCCGATGCGA TTGCGGGTGT GATCAACATT ATTCTGAAAA GCGCTGTGAA TAAACTGACC
GTGAATGTGA CAACGGGCGC GAATGTGACT TCACAGGCGG ATAATAATAT CGACGGACAA
ACCGTGCAGA CGGGTGTGAA TTACGGTATT CCTGTCGGAC AAAAAGGTGG TTACATCAAC
TTTGGTGGTT CTTATGACTA TCGCAATTAT ACCAACCGTT CCGGTCCCTG GGAAGGAGCT
ATTTACAGAA CATATCCCGG TGGTGTCGAT AAGACGGATT CTTTCCTGCT GGCTAATAAT
ATCACCCGTA ATGATATCCG TATGCGTGCC GGCCAATCCA GGTTACGCAG TGCACAGCTC
TTTGTCAATG CCAATATCCC GTTGGAAAAT GATGCGGAGG TTTATTTCTT CGGAGGGATC
GGTTATCGCA ACGGAGATGC AGCCGGTGTA TACCGTTTAC CACATGACAG TCGTAACATC
ATCGATATCT ATCCACTGGG CTTCCTGCCG ATGATACAAA GCGATATTTA CGACCGTTCA
CTGGCAGCAG GTATAAGGGG CCATCTTGGT GACTGGAAAG TTGACTTTAG TAACACTTAC
GGTCGCAATG AATTTGGTTT CAAAGTAGAA AATTCACTGA ATGCATCATT ACAGAAAGCA
TCTCCTACAC GTTTTACCTG TGGAGGTCCT GTTTTCACCC AGAATACCAC GAACCTCGAT
TTCTCCCGTC GCCTGGATGT ATTGCAGGGA TTGGATATCG CTTTTGGTGC GGAGCATCGT
TTCGAACAAT ATGAACTGGT GGCAGGAGCA GAAAACTCCT ACACTGACTA TGGCCGTGCA
TCACAGATCG GCACAGACGC CAATGGGAAT CCTATCCTGA TTCCTGATCC GCAGGGCGCT
GTCAATACAA TCTTTGGTCC TGATGGTACA GCAAGACCCG GTGGGGCACA GGTATTTCCT
GGATTCCGTC CGGAGAATGC GATCAAAGCG ACCCGTAGTG CTATTTCCGG ATATGTGGAT
GTAGAGGCCA ATTTTACAAA CGCCTTCCTG TTAGGTGGTG CATTACGTTT TGAGAATTAT
AATGATTTCG GGAGTACGCT TAATGGTAAG CTGACCACAC GTTATAAGCT GAGTGAAAAG
ACGGCTGTAC GGGCTTCTGC CAGCACTGGT TTCAGAGCGC CTTCGCTGCA CCAGCGTTAT
TATTCTTCTA CCTCTACGTT GTTTGTGGAT GGAGTACCTT ATGAAGTGGG TACTTTCACG
AATGATAGTC GTCCGGCGCA ACTGCTGGGT ATTCCTGAAC TCAAACCGGA AAAATCAAAA
AGCATCAGTG CCGGTTTCAC CGGTAGTTTC GGCAAATTCA ATCTGACCCT GGACGGTTAT
TACACCCGTA TCAATGACCG TATCGTATAT ACGGACCAGT TCTCCGGCAA CAATGCAGAT
ACAGCTTCTG CGATCGATAA GGAAATATAT CAGCTATTGT CGCTTGCAAA CGCTAATAGA
GCAGCCTTCT TTGCGAATGC CATCAACTCC GAAACAAAGG GTGTGGACCT GGTATTGACA
TATAGCACCC GTTTAGGCGG AGGTACTTTC CGTGCGGATC TTTCCGGTAC GTATAGCTAT
ACGCAAAGGG TAGGGGAGAT TAAGTCCTCT GAAAAACTAA AAGGCAAGGA AAGTATTTAT
TTCAGCCGGG CGAGCAGGAT CTACCTGGAA AGAAGTGTGC CCCGTGAAAA GGTGAATCTG
ACATTGTCCT ATAACATTGG TAAGTTCAAC GCTTTCCTGC GTAACGTGCA TTTCGGCAGC
GTAGAAGAAG CGACTAACGA TCCTAAGTTC TACCAGACTT TCTCCGCGAA AGTAGTGACA
GATGTGGCGG TTGGTTATAA ACTCACCCCG GCCCTGAAAC TTAGCGTGGG ATCTAATAAC
GTTTTCGACG TTTACCCGGA CCTGGTAGAG AATCCTGCGA ACACGACCAA CAACCAGTTC
AGGTATTCCA GGAGAGCTAC CCAATTTGGT TATAATGGAC GTTTTCTGTT CGCAAGACTG
GAACTGAATT TATAA
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| Protein sequence | MLHVVTHLRS IVLPLLAFLC LSTLAYAQTG TITGTVTDGR GPLANATVHI EHTNKGGYTN
AQGRFSLEIV PGTHTVQISY VGFVAQRKTV TVSAGQTTSL DVVLAASTTM NELVVLGSRN
LPRTQTETPV PVDVIDIKRI AADAPQVSIN QILNYVAPSF SSGTQTVADG TDHIDPASLR
GLGPDQVLVL VNGKRRYNTA LVNVNGTFGR GAVGTDMNSI PTSAIDRVEI LRDGAAAQYG
SDAIAGVINI ILKSAVNKLT VNVTTGANVT SQADNNIDGQ TVQTGVNYGI PVGQKGGYIN
FGGSYDYRNY TNRSGPWEGA IYRTYPGGVD KTDSFLLANN ITRNDIRMRA GQSRLRSAQL
FVNANIPLEN DAEVYFFGGI GYRNGDAAGV YRLPHDSRNI IDIYPLGFLP MIQSDIYDRS
LAAGIRGHLG DWKVDFSNTY GRNEFGFKVE NSLNASLQKA SPTRFTCGGP VFTQNTTNLD
FSRRLDVLQG LDIAFGAEHR FEQYELVAGA ENSYTDYGRA SQIGTDANGN PILIPDPQGA
VNTIFGPDGT ARPGGAQVFP GFRPENAIKA TRSAISGYVD VEANFTNAFL LGGALRFENY
NDFGSTLNGK LTTRYKLSEK TAVRASASTG FRAPSLHQRY YSSTSTLFVD GVPYEVGTFT
NDSRPAQLLG IPELKPEKSK SISAGFTGSF GKFNLTLDGY YTRINDRIVY TDQFSGNNAD
TASAIDKEIY QLLSLANANR AAFFANAINS ETKGVDLVLT YSTRLGGGTF RADLSGTYSY
TQRVGEIKSS EKLKGKESIY FSRASRIYLE RSVPREKVNL TLSYNIGKFN AFLRNVHFGS
VEEATNDPKF YQTFSAKVVT DVAVGYKLTP ALKLSVGSNN VFDVYPDLVE NPANTTNNQF
RYSRRATQFG YNGRFLFARL ELNL
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