Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_5907 |
Symbol | |
ID | 8362088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 7501424 |
End bp | 7502374 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644968046 |
Product | hypothetical protein |
Protein accession | YP_003125526 |
Protein GI | 256424873 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.234146 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.772343 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAGTACA CCGCTATCAA TAACTGGATT CCCTATAAAC TCACCTATGC GGAAAAGGGA TGGATGGTAA AATGGCTGGA CCTCGCCGAT CAACGCATGG ACCTGCCTTT CTTTGATGAA ACCATTCAGC TGTGTAGAAT AAAACAGCTG GAAAGATCAC GGTTGCAAAG CATTTCCACC GCTGATTTCC TCATGGATGC CTGTAAAGAC CTCCCCGGAT TACAGCCTTC CGCTTTCGTA TTTCATGTAT CGCGCTGCGG ATCGACACTG GTCTCACAAG CCTTCACAAC ATCAGCCGAA AATATAGTGG TGGCAGAAGC ACCTTTGCTG GATGAAATAC TCCGTAGTAA CGAGCAACAG CCAGATCTCG ATCCACAAAC CCGGGAAAAC TGGTTCAAAG CGGCCATCAA CCTCATGGGA CAACACCGCA ATGCACAGGA GACCGATTAC ATTATCAAAC TGGACAGCTG GCATATTCAT TTCTACGAAC TACTGAGAGC CTGGTACCCG AACACACCCT TTTTCTTCCT GTACCGCCGG CCCGACCAGG TAGTCGCTTC GCATGAAAAA CGCAGAGGTT TACAGGCCGT TCCCGGTATG ATCAATCCTG CCCTGCTGAA AGTAGGCGAT GTTAAACGTT TTGGCAGCGA TTTTAACCAG TATACCTCCG CGGTACTGTA TGAGTACTTC ATACAATTAC AGGCGATCCA TGGACTGCAG CATCCGCTTA ACGGGTTTTT TGACTATGCC GATGGCGTAT TTGAAATGAT GGAAGCTTTC AGCACCTTCT CCCGGATTCC CATAAAGGAT GCCGCCCTGT TAAGCGAACG GTTAAAATAT CACAGCAAGT ATAAAGGCGA TGTATTCAAA CCAGATGCTG CTGCTGATGC AAAGTATTTT CACGAAGATT GTCATGCTGC TTACGAACAG CTGAATGCAC AGATAAAATA A
|
Protein sequence | MQYTAINNWI PYKLTYAEKG WMVKWLDLAD QRMDLPFFDE TIQLCRIKQL ERSRLQSIST ADFLMDACKD LPGLQPSAFV FHVSRCGSTL VSQAFTTSAE NIVVAEAPLL DEILRSNEQQ PDLDPQTREN WFKAAINLMG QHRNAQETDY IIKLDSWHIH FYELLRAWYP NTPFFFLYRR PDQVVASHEK RRGLQAVPGM INPALLKVGD VKRFGSDFNQ YTSAVLYEYF IQLQAIHGLQ HPLNGFFDYA DGVFEMMEAF STFSRIPIKD AALLSERLKY HSKYKGDVFK PDAAADAKYF HEDCHAAYEQ LNAQIK
|
| |