Gene Cpin_5907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5907 
Symbol 
ID8362088 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7501424 
End bp7502374 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content47% 
IMG OID644968046 
Producthypothetical protein 
Protein accessionYP_003125526 
Protein GI256424873 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.234146 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.772343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTACA CCGCTATCAA TAACTGGATT CCCTATAAAC TCACCTATGC GGAAAAGGGA 
TGGATGGTAA AATGGCTGGA CCTCGCCGAT CAACGCATGG ACCTGCCTTT CTTTGATGAA
ACCATTCAGC TGTGTAGAAT AAAACAGCTG GAAAGATCAC GGTTGCAAAG CATTTCCACC
GCTGATTTCC TCATGGATGC CTGTAAAGAC CTCCCCGGAT TACAGCCTTC CGCTTTCGTA
TTTCATGTAT CGCGCTGCGG ATCGACACTG GTCTCACAAG CCTTCACAAC ATCAGCCGAA
AATATAGTGG TGGCAGAAGC ACCTTTGCTG GATGAAATAC TCCGTAGTAA CGAGCAACAG
CCAGATCTCG ATCCACAAAC CCGGGAAAAC TGGTTCAAAG CGGCCATCAA CCTCATGGGA
CAACACCGCA ATGCACAGGA GACCGATTAC ATTATCAAAC TGGACAGCTG GCATATTCAT
TTCTACGAAC TACTGAGAGC CTGGTACCCG AACACACCCT TTTTCTTCCT GTACCGCCGG
CCCGACCAGG TAGTCGCTTC GCATGAAAAA CGCAGAGGTT TACAGGCCGT TCCCGGTATG
ATCAATCCTG CCCTGCTGAA AGTAGGCGAT GTTAAACGTT TTGGCAGCGA TTTTAACCAG
TATACCTCCG CGGTACTGTA TGAGTACTTC ATACAATTAC AGGCGATCCA TGGACTGCAG
CATCCGCTTA ACGGGTTTTT TGACTATGCC GATGGCGTAT TTGAAATGAT GGAAGCTTTC
AGCACCTTCT CCCGGATTCC CATAAAGGAT GCCGCCCTGT TAAGCGAACG GTTAAAATAT
CACAGCAAGT ATAAAGGCGA TGTATTCAAA CCAGATGCTG CTGCTGATGC AAAGTATTTT
CACGAAGATT GTCATGCTGC TTACGAACAG CTGAATGCAC AGATAAAATA A
 
Protein sequence
MQYTAINNWI PYKLTYAEKG WMVKWLDLAD QRMDLPFFDE TIQLCRIKQL ERSRLQSIST 
ADFLMDACKD LPGLQPSAFV FHVSRCGSTL VSQAFTTSAE NIVVAEAPLL DEILRSNEQQ
PDLDPQTREN WFKAAINLMG QHRNAQETDY IIKLDSWHIH FYELLRAWYP NTPFFFLYRR
PDQVVASHEK RRGLQAVPGM INPALLKVGD VKRFGSDFNQ YTSAVLYEYF IQLQAIHGLQ
HPLNGFFDYA DGVFEMMEAF STFSRIPIKD AALLSERLKY HSKYKGDVFK PDAAADAKYF
HEDCHAAYEQ LNAQIK