Gene Cpin_5873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_5873 
Symbol 
ID8362053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp7466999 
End bp7467523 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content43% 
IMG OID644968011 
ProductMethyltransferase type 11 
Protein accessionYP_003125492 
Protein GI256424839 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.307936 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAC AGGAAGCTAT TCAGTTAATA CAGCATAAGG ATCTATCTGT TGATACACCT 
GTTACCTGGG CAGATCTCGG TTGCGGATCA GGTACGTTTA CAGCGGCGCT TGCGCATTAT
CTTCCCGCAG GTAGTACTAT CTATGCAGTA GATAAAGCAA TGTCGCCTGA TCTGCATATA
CCTGCTCCCT CAGTTGTAGA AGTCAGTCCT TATCAACTTG ATTTTGTAAA ACATGAGTTG
CCATTTGCAT CGTTGAATGG TATTATCATG GCAAATGCCC TGCATTATGT GAAAGACCAG
GCAGCATTTG TACGTAAACT CCAGAAAGCT TTACGTCCTG ATGGTATACT GGTGATGGTA
GAATATGATA CAGACACCCC TGTACCGGTA TGGGTACCTT ATCCGCTTAG TTTTACCCGT
CTGAAAAAGT TATTCTCAGC AGCGGGATAC GGACACATAG AAAAGATCGG AGAACGCCCT
TCGATATATG GACGTGCCAA CCTATATGCT TCACTTATAA AATAA
 
Protein sequence
MKLQEAIQLI QHKDLSVDTP VTWADLGCGS GTFTAALAHY LPAGSTIYAV DKAMSPDLHI 
PAPSVVEVSP YQLDFVKHEL PFASLNGIIM ANALHYVKDQ AAFVRKLQKA LRPDGILVMV
EYDTDTPVPV WVPYPLSFTR LKKLFSAAGY GHIEKIGERP SIYGRANLYA SLIK