| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5867 |
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| Symbol | |
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| ID | 8362047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7458330 |
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| End bp | 7459523 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644968005 |
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| Product | Alpha-N-acetylgalactosaminidase |
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| Protein accession | YP_003125486 |
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| Protein GI | 256424833 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0673] Predicted dehydrogenases and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.326374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.716064 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATACAA CCAGTAGAAG GCATTTTTTG AAGAATGCCG CCATTTTATC CCCTGTACTT
ACCTTTCTGC CATCATATCT GACGGCAGGG ACAGGTTCCC GCTTACGTAC CGGTTTTATT
GGTCTTGGTC CCTGGGGACA ACAATATCTT GCGCATGCCC TGCAGCATAA AGATGTTGAC
GTCAGGGCTA TCTGTGACAC AGATCCGGCA GCTATCCGTC AAAGCCTGCA CTTGTTCAGC
GAAGCAGGTT ATAGCCGTCC GGAGATCTTT AAAAACAGCT ACAGCGACTT ATTATCCCGA
AAAGACATTG ATGCTGTGAT CATAGCGGCC CCCTGGCAAC TGCACTACGA AATAGCCAAG
GCAGCGATGC TGGCAGGCAA ACACGTAGCT TGTGGCGCCA TTATGGGTAC GACACTGGAA
GAGCACAAGG ACATTGTCCG CATCAGTGAG CAGACCGGCT GTCAGTACTT CACTTTGGAA
GAAGACAGCT ATCGTTCTGA TCTGCAGGCT GCGGCCAATA TGGCGAAAGC TGGTCTTTTC
GGTGAATTAC AGGCTGTTCG CGCAGGCGCA CGTTACGATG TACTGCCAGC TGTCCATGAA
GGCGAAGCTG CTCCTTATCC TGTTTATCCC GCACTGGCAG CCACCAGGAT GCTGGGCGTG
GGAAAAGACA ATCCTTTTGT GTCATTGGAG ATAGTAAAGC AAACGCAGAC GTTTGCCGTT
AACAAGCCAC ATGCAAAGAC AGGAGAAGCG AGGCTGATGT ACCAGTCAGG TGAGGTCAGT
ACCATCCGTT TAACGACTAA ACAGGGACAG GTTTTATCCT TACAGATGGA CCGCGGTCAG
CGGCAGCCAG TTTCAACGGG ATTCAGGATA ACGGGAACGG CAGGTTCCTG GGTAGATACA
TTCAATAGTA TTTATTTAAA AAATCAGCTA ACTTGCAACC AACTTTGGAA TGCAGGGAAA
CCCTATATCA AGGAGTACGC ACAGCCAACT GATACACGAC GTTACAAACG TCTGACAGCC
AATAAGGAAT GTGCCCTGGC CCTACAGGAG TTTATCGACC TGGCAAATCA ACCTGCCGAA
GCGTTATCCG TCTATACCGC TGCTACCAAT AGTATGATCG GCCCTTTAGC CGCACTTTCT
GCGCAACATA ACCACACGAT GAACTTTCCC GAGTTCAGCA ATTCAACTAT TTAA
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| Protein sequence | MHTTSRRHFL KNAAILSPVL TFLPSYLTAG TGSRLRTGFI GLGPWGQQYL AHALQHKDVD
VRAICDTDPA AIRQSLHLFS EAGYSRPEIF KNSYSDLLSR KDIDAVIIAA PWQLHYEIAK
AAMLAGKHVA CGAIMGTTLE EHKDIVRISE QTGCQYFTLE EDSYRSDLQA AANMAKAGLF
GELQAVRAGA RYDVLPAVHE GEAAPYPVYP ALAATRMLGV GKDNPFVSLE IVKQTQTFAV
NKPHAKTGEA RLMYQSGEVS TIRLTTKQGQ VLSLQMDRGQ RQPVSTGFRI TGTAGSWVDT
FNSIYLKNQL TCNQLWNAGK PYIKEYAQPT DTRRYKRLTA NKECALALQE FIDLANQPAE
ALSVYTAATN SMIGPLAALS AQHNHTMNFP EFSNSTI
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