| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_5862 |
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| Symbol | |
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| ID | 8362042 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 7445269 |
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| End bp | 7446192 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644968000 |
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| Product | hypothetical protein |
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| Protein accession | YP_003125481 |
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| Protein GI | 256424828 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03519] Bacteroidetes-specific putative membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.361992 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATA AACTTAAAAT ACGTTCGTTC ATCGTCAGCA GCCTTTTATT GGCTGCTGGC
ATGAACCAAC ATGCTGATGC ACAGTCTCTC AGTGATGCAC AGGCATTGCT GGAGCCTTCA
GGCACACAGT ATTTTCAGAA TCAGTACCTG GCAAACCCTG CTATGGCTGG TCTTGAAAAA
GGAGTCCACT TCAACGGCGC TTACCGTCGT CAGTGGGGCG GTATCGAAGG AGCGCCGGTA
ACAAAGTTCT TCTCAGCAGA CGCTGCCATG GGTAACAGGG TCGGCGCCGG TTTACACGTT
TTCAACGATG TAGCTGGTCT GATCAACAGA ACCCGTGTAG CGTTAACATA TGCGTATCAC
CTGCCGCTGA CAAATCCGGA TCAGCAACTG CATTTCGGAT TATCGCTGGC ATGGAACGTA
CAGCGTATAG ATTACAAAAA CCTGAACGGA GATATAAACG ATCCTTCCGT AGGCGCCTTT
AACCGTCGCG ATAACTATTT CGAGGCGGAA TATGGTATGG CTTACACGGA TACCAAACTG
ACTTTACAGG CATCCATTCC GAACGTGAGA AGTCTCTTCA CAGGCGATAA CAAAGCCGTA
GATGGTGGTG GTATCTTCTT TACCGCTGCA TCCTACCGGT TTGCCGTAGA TGAGACGATT
TCCTCTATCG AGCCTAAAGT ATGCTATCGC GGTGTACGCG GATATGACAA TATCCTGGAC
GCCGGCGTGA ACGTATCTTT CCTGGATGAT GTGGCTAACG TAATGGCCGT ATATCATACT
TCGAAAAGTC TGACAGCAGG TATTGGTGTT AACATTCTGA AAACCGTAGG TATACAGGCA
ATGTATACTA CGCAGACAGG TGGTATCAAA ACCTATGTTG ATGGCACCTA TGAAATAGGC
GCAACTATCA ACCTGTTCAA ATAA
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| Protein sequence | MSYKLKIRSF IVSSLLLAAG MNQHADAQSL SDAQALLEPS GTQYFQNQYL ANPAMAGLEK
GVHFNGAYRR QWGGIEGAPV TKFFSADAAM GNRVGAGLHV FNDVAGLINR TRVALTYAYH
LPLTNPDQQL HFGLSLAWNV QRIDYKNLNG DINDPSVGAF NRRDNYFEAE YGMAYTDTKL
TLQASIPNVR SLFTGDNKAV DGGGIFFTAA SYRFAVDETI SSIEPKVCYR GVRGYDNILD
AGVNVSFLDD VANVMAVYHT SKSLTAGIGV NILKTVGIQA MYTTQTGGIK TYVDGTYEIG
ATINLFK
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